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血红素蛋白中配体的超快动力学

Ultrafast dynamics of ligands within heme proteins.

作者信息

Vos Marten H

机构信息

Laboratoire d'Optique et Biosciences, CNRS, Ecole Polytechnique, F-91128 Palaiseau, France.

出版信息

Biochim Biophys Acta. 2008 Jan;1777(1):15-31. doi: 10.1016/j.bbabio.2007.10.004. Epub 2007 Oct 22.

Abstract

Physiological bond formation and bond breaking events between proteins and ligands and their immediate consequences are difficult to synchronize and study in general. However, diatomic ligands can be photodissociated from heme, and thus in heme proteins ligand release and rebinding dynamics and trajectories have been studied on timescales of the internal vibrations of the protein that drive many biochemical reactions, and longer. The rapidly expanding number of characterized heme proteins involved in a large variety of functions allows comparative dynamics-structure-function studies. In this review, an overview is given of recent progress in this field, and in particular on initial sensing processes in signaling proteins, and on ligand and electron transfer dynamics in oxidases and cytochromes.

摘要

一般来说,蛋白质与配体之间的生理键形成和键断裂事件及其直接后果很难同步并进行研究。然而,双原子配体可以从血红素上光解离,因此对于血红素蛋白,已经在驱动许多生化反应的蛋白质内部振动时间尺度及更长时间尺度上研究了配体释放和重新结合的动力学及轨迹。参与多种功能的已表征血红素蛋白数量迅速增加,这使得能够进行比较动力学-结构-功能研究。在本综述中,概述了该领域的最新进展,特别是信号蛋白中的初始传感过程,以及氧化酶和细胞色素中的配体和电子转移动力学。

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