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用于检测差异基因表达的t检验的功效估计

Power estimation of the t test for detecting differential gene expression.

作者信息

Begun Alexander

机构信息

Institute of Medical Informatics and Statistics, Kiel University, Brunswiker Str. 10, 24105 Kiel, Germany.

出版信息

Funct Integr Genomics. 2008 May;8(2):109-13. doi: 10.1007/s10142-007-0061-8. Epub 2007 Nov 13.

Abstract

There exist now a number of statistical methods for detecting differential gene expression in experiments with microarray data. In trials under two conditions, a version of the two-sample t statistic is usually used. However, the problem of estimating the power for these tests has so far been insufficiently studied. In this paper, we propose a method to calculate the power of the robust t test for detecting differential gene expression in experiments with twins. We discuss also the results of the implementation of this method to simulated data.

摘要

目前存在多种用于检测微阵列数据实验中差异基因表达的统计方法。在两种条件下的试验中,通常会使用两样本t统计量的一个版本。然而,到目前为止,对这些检验功效估计问题的研究还不够充分。在本文中,我们提出了一种计算稳健t检验功效的方法,用于检测双胞胎实验中的差异基因表达。我们还讨论了将该方法应用于模拟数据的结果。

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