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模拟双尾梯度:稳定蛋白质的扩散与可逆核捕获

Modeling the bicoid gradient: diffusion and reversible nuclear trapping of a stable protein.

作者信息

Coppey Mathieu, Berezhkovskii Alexander M, Kim Yoosik, Boettiger Alistair N, Shvartsman Stanislav Y

机构信息

Department of Chemical Engineering and Lewis-Sigler Institute for Integrative Genomics, Princeton University, USA.

出版信息

Dev Biol. 2007 Dec 15;312(2):623-30. doi: 10.1016/j.ydbio.2007.09.058. Epub 2007 Oct 6.

Abstract

The Bicoid gradient in the Drosophila embryo provided the first example of a morphogen gradient studied at the molecular level. The exponential shape of the Bicoid gradient had always been interpreted within the framework of the localized production, diffusion, and degradation model. We propose an alternative mechanism, which assumes no Bicoid degradation. The medium where the Bicoid gradient is formed and interpreted is very dynamic. Most notably, the number of nuclei changes over three orders of magnitude from fertilization, when Bicoid synthesis is initiated, to nuclear cycle 14 when most of the measurements were taken. We demonstrate that a model based on Bicoid diffusion and nucleocytoplasmic shuttling in the presence of the growing number of nuclei can account for most of the properties of the Bicoid concentration profile. Consistent with experimental observations, the Bicoid gradient in our model is established before nuclei migrate to the periphery of the embryo and remains stable during subsequent nuclear divisions.

摘要

果蝇胚胎中的双尾蛋白梯度提供了在分子水平上研究形态发生素梯度的首个实例。双尾蛋白梯度的指数形状一直是在局部产生、扩散和降解模型的框架内进行解释的。我们提出了一种替代机制,该机制假定不存在双尾蛋白降解。形成和解释双尾蛋白梯度的介质是非常动态的。最显著的是,从受精时双尾蛋白合成开始,到进行大多数测量时的核周期14,细胞核数量变化超过三个数量级。我们证明,在细胞核数量不断增加的情况下,基于双尾蛋白扩散和核质穿梭的模型可以解释双尾蛋白浓度分布的大部分特性。与实验观察结果一致,我们模型中的双尾蛋白梯度在细胞核迁移到胚胎周边之前就已建立,并在随后的核分裂过程中保持稳定。

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