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酵母三号染色体6.3 kb片段的序列揭示了一个编码假定错配结合蛋白的开放阅读框。

The sequence of a 6.3 kb segment of yeast chromosome III reveals an open reading frame coding for a putative mismatch binding protein.

作者信息

Valle G, Bergantino E, Lanfranchi G, Carignani G

机构信息

Dipartimento di Biologia, Università degli Studi di Padova, Italy.

出版信息

Yeast. 1991 Dec;7(9):981-8. doi: 10.1002/yea.320070910.

DOI:10.1002/yea.320070910
PMID:1803822
Abstract

We report the sequence of a 6.3 kb segment of DNA mapping near the end of the right arm of chromosome III of Saccharomyces cerevisiae. The sequence reveals a major open reading frame coding for a putative protein of 1047 amino acids with a striking similarity to the bacterial proteins involved in recognition of mismatched DNA base pairs. This is particularly interesting as the existence of a yeast mismatch repair system similar to that of bacteria has been postulated for some years, but a yeast protein homologous to the bacterial mismatch binding protein had not been identified. The results of a comparison of the putative yeast mismatch binding protein with the bacterial mismatch binding proteins and with two cognate mammalian sequences, support the idea that a similar mismatch repair system may be present also in mammalian cells. The possibility that all of these proteins may have evolved from a common ancestral gene is also discussed.

摘要

我们报道了酿酒酵母III号染色体右臂末端附近一段6.3 kb DNA片段的序列。该序列揭示了一个主要的开放阅读框,编码一种推定的含1047个氨基酸的蛋白质,它与参与识别错配DNA碱基对的细菌蛋白质有着显著的相似性。这一点尤其有趣,因为多年来一直推测酵母中存在与细菌类似的错配修复系统,但尚未鉴定出与细菌错配结合蛋白同源的酵母蛋白。将推定的酵母错配结合蛋白与细菌错配结合蛋白以及两个相关的哺乳动物序列进行比较的结果,支持了哺乳动物细胞中也可能存在类似错配修复系统的观点。还讨论了所有这些蛋白质可能都从一个共同祖先基因进化而来的可能性。

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1
The sequence of a 6.3 kb segment of yeast chromosome III reveals an open reading frame coding for a putative mismatch binding protein.酵母三号染色体6.3 kb片段的序列揭示了一个编码假定错配结合蛋白的开放阅读框。
Yeast. 1991 Dec;7(9):981-8. doi: 10.1002/yea.320070910.
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Sequence analysis of a 33.1 kb fragment from the left arm of Saccharomyces cerevisiae chromosome X, including putative proteins with leucine zippers, a fungal Zn(II)2-Cys6 binuclear cluster domain and a putative alpha 2-SCB-alpha 2 binding site.对酿酒酵母X号染色体左臂上一个33.1 kb片段进行序列分析,该片段包含具有亮氨酸拉链的推定蛋白、一个真菌Zn(II)2-Cys6双核簇结构域以及一个推定的α2-SCB-α2结合位点。
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Analysis of an 11.7 kb DNA fragment of chromosome XI reveals a new tRNA gene and four new open reading frames including a leucine zipper protein and a homologue to the yeast mitochondrial regulator ABF2.对第十一条染色体上一个11.7 kb的DNA片段进行分析,发现了一个新的tRNA基因和四个新的开放阅读框,其中包括一个亮氨酸拉链蛋白和一个与酵母线粒体调节因子ABF2同源的蛋白。
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引用本文的文献

1
The yeast gene MSH3 defines a new class of eukaryotic MutS homologues.酵母基因MSH3定义了一类新的真核生物MutS同源物。
Mol Gen Genet. 1993 May;239(1-2):97-108. doi: 10.1007/BF00281607.
2
Dual requirement in yeast DNA mismatch repair for MLH1 and PMS1, two homologs of the bacterial mutL gene.酵母DNA错配修复对细菌mutL基因的两个同源物MLH1和PMS1的双重需求。
Mol Cell Biol. 1994 Jan;14(1):407-15. doi: 10.1128/mcb.14.1.407-415.1994.
3
Unrepaired heteroduplex DNA in Saccharomyces cerevisiae is decreased in RAD1 RAD52-independent recombination.
酿酒酵母中未修复的异源双链DNA在不依赖RAD1和RAD52的重组中减少。
Genetics. 1994 Jun;137(2):393-405. doi: 10.1093/genetics/137.2.393.
4
Cloning and expression of the Xenopus and mouse Msh2 DNA mismatch repair genes.
Nucleic Acids Res. 1994 Dec 25;22(25):5723-8. doi: 10.1093/nar/22.25.5723.
5
Identification of two mismatch-binding activities in protein extracts of Schizosaccharomyces pombe.粟酒裂殖酵母蛋白提取物中两种错配结合活性的鉴定。
Nucleic Acids Res. 1994 Dec 11;22(24):5289-95. doi: 10.1093/nar/22.24.5289.
6
New nucleotide sequence data on the EMBL File Server.欧洲分子生物学实验室文件服务器上的新核苷酸序列数据。
Nucleic Acids Res. 1992 Jun 25;20(12):3257-75. doi: 10.1093/nar/20.12.3257.
7
The swi4+ gene of Schizosaccharomyces pombe encodes a homologue of mismatch repair enzymes.粟酒裂殖酵母的swi4+基因编码错配修复酶的一个同源物。
Nucleic Acids Res. 1992 May 11;20(9):2271-8. doi: 10.1093/nar/20.9.2271.