An Dong-Shan, Im Wan-Taek, Lee Sung-Talk, Choi Woo-Young, Yoon Min-Ho
Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 305-701, Korea.
J Microbiol Biotechnol. 2007 May;17(5):705-11.
Two novel strains of the Cytophaga-Flexibacter-Bacteroides (CFB) group, designated Gsoil 219" and Gsoil 2381, were isolated from soil of a ginseng field of Pocheon Province in Korea. Both strains were Gram-negative, aerobic, nonmotile, nonspore-forming, and rod-shaped. Phylogenetic analysis based on 16S rRNA gene sequences indicated that both isolates belong to the genus Chitinophaga but were clearly separated from established species of this genus. The sequence similarities between strain Gsoil 219T and type strains of the established species and between strain Gsoil 238T and type strains of the established species ranged from 91.4 to 94.7% and 91.6 to 94.2%, respectively. Phenotypic and chemotaxonomic data (major menaquinone, MK-7; major fatty acids, iso-C15:0 and C(16:1) omega5c; major hydroxy fatty acid, iso-C(17:0) 3-OH; major polyamine, homospermidine) supported the affiliation of both strains Gsoil 219T and Gsoil 238T to the genus Chitinophaga. Furthermore, the results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of both strains from the other validated Chitinophaga species. Therefore, the two isolates represent two novel species, for which the name Chitinophaga soli sp. nov. (type strain, Gsoil 219T=KCTC 12650T=DSM 18093T) and Chitinophaga terrae sp. nov. (type strain, Gsoil 238T=KCTC 12651T=DSM 18078T) are proposed.
从韩国抱川市一个人参田的土壤中分离出两株噬纤维菌-屈挠杆菌-拟杆菌(CFB)群的新菌株,分别命名为“Gsoil 219”和“Gsoil 238”。两株菌均为革兰氏阴性、需氧、不运动、不产芽孢且呈杆状。基于16S rRNA基因序列的系统发育分析表明,这两株分离菌均属于噬几丁质菌属,但与该属已确立的种明显不同。菌株Gsoil 219T与已确立种的模式菌株之间以及菌株Gsoil 238T与已确立种的模式菌株之间的序列相似性分别为91.4%至94.7%和91.6%至94.2%。表型和化学分类数据(主要甲基萘醌,MK-7;主要脂肪酸,异-C15:0和C16:1 ω5c;主要羟基脂肪酸,异-C17:0 3-OH;主要多胺,高亚精胺)支持菌株Gsoil 219T和Gsoil 238T均隶属于噬几丁质菌属。此外,生理生化测试结果使这两株菌在基因型和表型上与其他已验证的噬几丁质菌种得以区分。因此,这两株分离菌代表两个新种,分别命名为土壤噬几丁质菌(Chitinophaga soli sp. nov.)(模式菌株,Gsoil 219T=KCTC 12650T=DSM 18093T)和陆地噬几丁质菌(Chitinophaga terrae sp. nov.)(模式菌株,Gsoil 238T=KCTC 12651T=DSM 18078T)。