Lee Dong-Heon, Oh Duck-Chul, Oh You-Sung, Malinverni Juliana C, Kukor Jerome J, Kahng Hyung-Yeel
Department of Life Science, Cheju National University, Jeju 690-756, Korea.
J Microbiol Biotechnol. 2007 Sep;17(9):1460-8.
In this study, an approx. 2.5-kb gene fragment including the catalase gene from Rhodospirillum rubrum S1 was cloned and characterized. The determination of the complete nucleotide sequence revealed that the cloned DNA fragment was organized into three open reading frames, designated as ORF1, catalase, and ORF3 in that order. The catalase gene consisted of 1,455 nucleotides and 484 amino acids, including the initiation and stop codons, and was located 326 bp upstream in the opposite direction of ORF1. The catalase was overproduced in Escherichia coli UM255, a catalase-deficient mutant, and then purified for the biochemical characterization of the enzyme. The purified catalase had an estimated molecular mass of 189 kDa, consisting of four identical subunits of 61 kDa. The enzyme exhibited activity over a broad pH range from pH 5.0 to pH 11.0 and temperature range from 20 degrees C to 60 degrees C. The catalase activity was inhibited by 3-amino-1,2,4-triazole, cyanide, azide, and hydroxylamine. The enzyme's K(m) value and V(max) of the catalase for H2O2 were 21.8 mM and 39,960 U/mg, respectively. Spectrophotometric analysis revealed that the ratio of A406 to A280 for the catalase was 0.97, indicating the presence of a ferric component. The absorption spectrum of catalase-4 exhibited a Soret band at 406 nm, which is typical of a heme-containing catalase. Treatment of the enzyme with dithionite did not alter the spectral shape and revealed no peroxidase activity. The combined results of the gene sequence and biochemical characterization proved that the catalase cloned from strain S1in this study was a typical monofunctional catalase, which differed from the other types of catalases found in strain S1.
在本研究中,克隆并鉴定了一段约2.5 kb的基因片段,其包含来自深红红螺菌S1的过氧化氢酶基因。完整核苷酸序列的测定表明,克隆的DNA片段被组织成三个开放阅读框,依次命名为ORF1、过氧化氢酶和ORF3。过氧化氢酶基因由1455个核苷酸和484个氨基酸组成,包括起始密码子和终止密码子,位于ORF1相反方向上游326 bp处。过氧化氢酶在过氧化氢酶缺陷型突变体大肠杆菌UM255中过量表达,然后进行纯化以对该酶进行生化特性分析。纯化的过氧化氢酶估计分子量为189 kDa,由四个61 kDa的相同亚基组成。该酶在pH 5.0至pH 11.0的广泛pH范围内以及20℃至60℃的温度范围内均表现出活性。过氧化氢酶活性受到3-氨基-1,2,4-三唑、氰化物、叠氮化物和羟胺的抑制。该酶对H2O2的K(m)值和V(max)分别为21.8 mM和39960 U/mg。分光光度分析表明,过氧化氢酶的A406与A280之比为0.97,表明存在铁成分。过氧化氢酶-4的吸收光谱在406 nm处呈现Soret带,这是含血红素过氧化氢酶的典型特征。用连二亚硫酸盐处理该酶不会改变光谱形状,且未显示出过氧化物酶活性。基因序列和生化特性分析的综合结果证明,本研究中从菌株S1克隆的过氧化氢酶是一种典型的单功能过氧化氢酶,与在菌株S1中发现的其他类型的过氧化氢酶不同。