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链霉菌氨肽酶P:生化特性及其N端结构域作用的深入研究

Streptomyces aminopeptidase P: biochemical characterization and insight into the roles of its N-terminal domain.

作者信息

Arima Jiro, Uesugi Yoshiko, Iwabuchi Masaki, Hatanaka Tadashi

机构信息

Research Institute for Biological Sciences (RIBS), Okayama, 7549-1 Kibichuo-cho, Kaga-gun, Okayama 716-1241, Japan.

出版信息

Protein Eng Des Sel. 2008 Jan;21(1):45-53. doi: 10.1093/protein/gzm068. Epub 2007 Dec 21.

Abstract

We purified and characterized the aminopeptidase P from Streptomyces costaricanus TH-4 (thAPP). This enzyme has a tetramer structure, a metal-ion preference toward Zn, broad substrate specificity and a narrow pH dependency for activity. The primary structure of thAPP, respectively, exhibits 91% and 65% identity with those of two other APPs-APP I and APP II-from Streptomyces lividans (slAPP I and slAPP II). We next overexpressed the genes encoding thAPP and slAPP II in Escherichia coli and characterized them. Two differences were apparent in their properties: slAPP II formed a dimer, whereas thAPP formed a tetramer; also, the alkaline side pKa for the catalytic action of slAPP II is higher than that of thAPP. Investigation using chimeras of both enzymes revealed that the N-terminal domain is associated with the determination of pKa values for catalytic action and quaternary structure.

摘要

我们对来自哥斯达黎加链霉菌TH-4的氨肽酶P(thAPP)进行了纯化和特性鉴定。该酶具有四聚体结构,对锌有金属离子偏好性,底物特异性广泛,活性的pH依赖性较窄。thAPP的一级结构与来自淡紫链霉菌的另外两种氨肽酶——APP I和APP II(slAPP I和slAPP II)分别具有91%和65%的同一性。接下来,我们在大肠杆菌中过表达了编码thAPP和slAPP II的基因并对它们进行了特性鉴定。它们的性质有两个明显差异:slAPP II形成二聚体,而thAPP形成四聚体;此外,slAPP II催化作用的碱性侧pKa高于thAPP。对这两种酶的嵌合体进行的研究表明,N端结构域与催化作用的pKa值和四级结构的确定有关。

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