Liu Justin, Louie Samuel, Hsu Willy, Yu Kristine M, Nicholas Hugh B, Rosenquist Grace L
Section of Neurobiology, Physiology and Behavior, University of California, Davis, 1 Shields Avenue, Davis, CA 95616, USA.
Am J Respir Cell Mol Biol. 2008 Jun;38(6):738-43. doi: 10.1165/rcmb.2007-0118OC. Epub 2008 Jan 24.
Post-translational sulfation of tyrosines affects the affinity and binding of at least some chemokine receptors to their ligand(s) and has been hypothesized to be a feature in all chemokine receptors. This binding initiates downstream signaling cascades. By this mechanism, tyrosine sulfation can influence the cells involved in acute and chronic events of cellular immunity. These events include leukocyte trafficking and airway inflammation important in asthma and chronic obstructive pulmonary disease (COPD). We are using computational methods to convert the poorly defined hypothesis of more widespread sulfation of chemokine receptors to more specific assessments of how closely the sequence environment of each tyrosine residue resembles the sequence environment of tyrosine residues proven to be sulfated. Thus, we provide specific and readily tested hypotheses about the tyrosine residues in all of the chemokine receptors. Tyrosine sulfation was predicted with high scores in the N-terminus domain of 13 out of 18 human chemokine receptor proteins using a position-specific scoring matrix, which was determined to be 94.2% accurate based on Receiver Operating Characteristic analysis. The remaining chemokine receptors have sites exhibiting features of tyrosine sulfation. These putative sites demonstrate clustering in a manner consistent with known tyrosine sulfation sites and conservation both within the chemokine receptor family and across mammalian species. Human chemokine receptors important in asthma and COPD, such as CXCR1, CXCR2, CXCR3, CXCR4, CCR1, CCR2, CCR3, CCR4, CCR5, and CCR8, contain at least one known or predicted tyrosine sulfation site. Recognition that tyrosine sulfation is found in most clinically relevant chemokine receptors could help the development of specific receptor-ligand antagonists to modulate events important in airway diseases.
酪氨酸的翻译后硫酸化作用会影响至少一些趋化因子受体与其配体的亲和力和结合,并且据推测这是所有趋化因子受体的一个特征。这种结合会启动下游信号级联反应。通过这种机制,酪氨酸硫酸化可以影响参与细胞免疫急性和慢性事件的细胞。这些事件包括在哮喘和慢性阻塞性肺疾病(COPD)中起重要作用的白细胞运输和气道炎症。我们正在使用计算方法,将关于趋化因子受体更广泛硫酸化的定义不明确的假设,转化为对每个酪氨酸残基的序列环境与已被证明发生硫酸化的酪氨酸残基的序列环境相似程度的更具体评估。因此,我们提供了关于所有趋化因子受体中酪氨酸残基的具体且易于检验的假设。使用位置特异性评分矩阵,在18种人类趋化因子受体蛋白中的13种的N端结构域中预测到酪氨酸硫酸化具有高分,基于接受者操作特征分析确定其准确率为94.2%。其余的趋化因子受体具有表现出酪氨酸硫酸化特征的位点。这些假定的位点以与已知酪氨酸硫酸化位点一致的方式聚集,并且在趋化因子受体家族内部以及跨哺乳动物物种中都具有保守性。在哮喘和COPD中起重要作用的人类趋化因子受体,如CXCR1、CXCR2、CXCR3、CXCR4、CCR1、CCR2、CCR3、CCR4、CCR5和CCR8,至少含有一个已知或预测的酪氨酸硫酸化位点。认识到在大多数临床相关的趋化因子受体中发现酪氨酸硫酸化,可能有助于开发特异性受体 - 配体拮抗剂,以调节在气道疾病中起重要作用的事件。