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丝氨酸蛋白酶抑制剂中C环片层聚合的结构基础。

A structural basis for loop C-sheet polymerization in serpins.

作者信息

Zhang Qingwei, Law Ruby H P, Bottomley Stephen P, Whisstock James C, Buckle Ashley M

机构信息

Department of Biochemistry and Molecular Biology, Monash University, Clayton, Melbourne, VIC 3800, Australia.

出版信息

J Mol Biol. 2008 Mar 7;376(5):1348-59. doi: 10.1016/j.jmb.2007.12.050. Epub 2008 Jan 3.

Abstract

In this study, we report the X-ray crystal structure of an N-terminally truncated variant of the bacterial serpin, tengpin (tengpinDelta42). Our data reveal that tengpinDelta42 adopts a variation of the latent conformation in which the reactive center loop is hyperinserted into the A beta-sheet and removed from the vicinity of the C-sheet. This conformational change leaves the C beta-sheet completely exposed and permits antiparallel edge-strand interactions between the exposed portion of the reactive center loop of one molecule and strand s2C of the C beta-sheet of the neighboring molecule in the crystal lattice. Our structural data thus reveal that tengpinDelta42 forms a loop C-sheet polymer in the crystal lattice. In vivo serpins have a propensity to misfold and form long-chain polymers, a process that underlies serpinopathies such as emphysema, thrombosis and dementia. Native serpins are thought to polymerize via a loop A-sheet mechanism. However, studies on plasminogen activator inhibitor 1 and the S49P variant of human neuroserpin reveal that the latent form of these molecules can also polymerize. Polymerization of latent neuroserpin may be important for the development of familial encephalopathy with neuroserpin inclusion bodies. Our structural data provide a possible mechanism for polymerization by latent serpins.

摘要

在本研究中,我们报道了细菌丝氨酸蛋白酶抑制剂腾品(tengpinDelta42)N端截短变体的X射线晶体结构。我们的数据表明,tengpinDelta42采用了一种潜在构象变体,其中反应中心环过度插入Aβ折叠并从C折叠附近移除。这种构象变化使Cβ折叠完全暴露,并允许一个分子反应中心环的暴露部分与晶格中相邻分子Cβ折叠的s2C链之间进行反平行边缘链相互作用。因此,我们的结构数据表明tengpinDelta42在晶格中形成了一种环C-折叠聚合物。在体内,丝氨酸蛋白酶抑制剂有错误折叠并形成长链聚合物的倾向,这一过程是诸如肺气肿、血栓形成和痴呆等丝氨酸蛋白酶抑制剂病的基础。天然丝氨酸蛋白酶抑制剂被认为是通过环A-折叠机制聚合的。然而,对纤溶酶原激活物抑制剂1和人神经丝氨酸蛋白酶抑制剂的S49P变体的研究表明,这些分子的潜在形式也可以聚合。潜在神经丝氨酸蛋白酶抑制剂的聚合可能对伴有神经丝氨酸蛋白酶抑制剂包涵体的家族性脑病的发展很重要。我们的结构数据为潜在丝氨酸蛋白酶抑制剂的聚合提供了一种可能的机制。

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