ONTO-PERL：一种支持生物本体开发与分析的应用程序编程接口。
ONTO-PERL: an API for supporting the development and analysis of bio-ontologies.
作者信息
Antezana Eric, Egaña Mikel, De Baets Bernard, Kuiper Martin, Mironov Vladimir
机构信息
Department of Plant Systems Biology, VIB, Department of Molecular Genetics, Ghent University, Technologiepark 927, 9052 Gent, Belgium.
出版信息
Bioinformatics. 2008 Mar 15;24(6):885-7. doi: 10.1093/bioinformatics/btn042. Epub 2008 Feb 1.
MOTIVATION
Many biomedical ontologies use OBO or OWL as knowledge representation language. The rapid increase of such ontologies calls for adequate tools to facilitate their use. In particular, there is a pressing need to programmatically deal with such ontologies in many applications, including data integration, text mining, as well as semantic applications supporting translational research.
RESULTS
We present an Application Programming Interface (API) called ONTO-PERL. This API significantly extends the repertoire of available tools supporting the development and analysis of bio-ontologies.
AVAILABILITY
The source code code as well as sample usage scripts can be found at: http://search.cpan.org/dist/ONTO-PERL/
动机
许多生物医学本体使用OBO或OWL作为知识表示语言。此类本体的快速增长需要适当的工具来促进其使用。特别是，在许多应用中，包括数据集成、文本挖掘以及支持转化研究的语义应用中，迫切需要以编程方式处理此类本体。
结果
我们提出了一个名为ONTO-PERL的应用程序编程接口（API）。该API显著扩展了支持生物本体开发和分析的可用工具的范围。
可用性
源代码以及示例使用脚本可在以下网址找到：http://search.cpan.org/dist/ONTO-PERL/
Zotero 插件