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镰状细胞血红蛋白聚合的双成核模型:完全整合及与实验数据的比较。

The double nucleation model for sickle cell haemoglobin polymerization: full integration and comparison with experimental data.

作者信息

Medkour Terkia, Ferrone Frank, Galactéros Frédéric, Hannaert Patrick

机构信息

EA 2381, Pharmacochimie Moléculaire et Systèmes Membranaires, Université Denis Diderot, Paris 7, France.

出版信息

Acta Biotheor. 2008 Jun;56(1-2):103-22. doi: 10.1007/s10441-008-9032-2. Epub 2008 Feb 5.

Abstract

Sickle cell haemoglobin (HbS) polymerization reduces erythrocyte deformability, causing deleterous vaso-occlusions. The double-nucleation model states that polymers grow from HbS aggregates, the nuclei, (i) in solution (homogeneous nucleation), (ii) onto existing polymers (heterogeneous nucleation). When linearized at initial HbS concentration, this model predicts early polymerization and its characteristic delay-time (Ferrone et al. J Mol Biol 183(4):591-610, 611-631, 1985). Addressing its relevance for describing complete polymerization, we constructed the full, non-linearized model (Simulink), The MathWorks). Here, we compare the simulated outputs to experimental progress curves (n = 6-8 different [HbS], 3-6 mM range, from Ferrone's group). Within 10% from start, average root mean square (rms) deviation between simulated and experimental curves is 0.04 +/- 0.01 (25 degrees C, n = 8; mean +/- standard error). Conversely, for complete progress curves, averaged rms is 0.48 +/- 0.04. This figure is improved to 0.13 +/- 0.01 by adjusting heterogeneous pathway parameters (p < 0.01): the nucleus stability (sigma(2) micro( cc ): + 40%), and the fraction of polymer surface available for nucleation (phi), from 5e(-7), (3 mM) to 13 (6 mM). Similar results are obtained at 37 degrees C. We conclude that the physico-chemical description of heterogeneous nucleation warrants refinements in order to capture the whole HbS polymerization process.

摘要

镰状细胞血红蛋白(HbS)聚合会降低红细胞的可变形性,导致有害的血管阻塞。双核模型指出,聚合物从HbS聚集体(即核)开始生长,(i)在溶液中(均相成核),(ii)在现有聚合物上(异相成核)。当在初始HbS浓度下进行线性化时,该模型可预测早期聚合及其特征延迟时间(费罗内等人,《分子生物学杂志》183(4):591 - 610, 611 - 631, 1985)。为了研究其在描述完整聚合过程中的相关性,我们构建了完整的非线性模型(Simulink,MathWorks公司)。在此,我们将模拟输出与实验进展曲线进行比较(n = 6 - 8个不同的[HbS],范围为3 - 6 mM,来自费罗内团队)。在起始的10%范围内,模拟曲线与实验曲线之间的平均均方根(rms)偏差为0.04 +/- 0.01(25摄氏度,n = 8;平均值 +/- 标准误差)。相反,对于完整的进展曲线,平均rms为0.48 +/- 0.04。通过调整异质途径参数(p < 0.01),该数值可提高到0.13 +/- 0.01:核稳定性(σ(2)微升:增加40%),以及聚合物表面可用于成核的部分(φ),从5e(-7)(3 mM)调整到13(6 mM)。在37摄氏度时也获得了类似结果。我们得出结论,为了捕捉整个HbS聚合过程,异相成核的物理化学描述需要进一步完善。

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