• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

一种从大量重叠寡脱氧核糖核苷酸进行PCR定向基因合成的改良方法。

A modified method for PCR-directed gene synthesis from large number of overlapping oligodeoxyribonucleotides.

作者信息

Cherry Jessica, Nieuwenhuijsen Bart W, Kaftan Edward J, Kennedy Jeffrey D, Chanda Pranab K

机构信息

Neuroscience Discovery Research Wyeth Research, CN8000, Princeton, NJ 08543, USA.

出版信息

J Biochem Biophys Methods. 2008 Apr 24;70(6):820-2. doi: 10.1016/j.jprot.2007.12.009. Epub 2008 Jan 9.

DOI:10.1016/j.jprot.2007.12.009
PMID:18272229
Abstract

Here we report an improved, reproducible, simple, rapid, and cost-effective PCR-based DNA synthesis method using short (25-40 bp) overlapping oligodeoxyribonucleotides (oligos). The method involves two steps; (1) assembly of multiple/overlapping oligos by PCR to generate the template DNA and (2) amplification of the template DNA sequence with the two outermost oligos as primers. We have tested this method by synthesizing approximately 35 genes ranging in size between 300 bp and 1700 bp and G+C content from moderate (30%) to high (65%). In addition, we used the method to introduce 29 mutations simultaneously into a single gene. Key to the success of this method is the use of optimized oligo concentrations and the type of DNA polymerase used. This simplified and highly reproducible method is expected to be beneficial for the synthesis of a wide variety of genes.

摘要

在此,我们报告一种改进的、可重复的、简单、快速且经济高效的基于聚合酶链式反应(PCR)的DNA合成方法,该方法使用短(25 - 40个碱基对)的重叠寡脱氧核糖核苷酸(寡核苷酸)。该方法包括两个步骤:(1)通过PCR组装多个/重叠寡核苷酸以生成模板DNA;(2)以两个最外侧的寡核苷酸作为引物扩增模板DNA序列。我们通过合成大约35个基因对该方法进行了测试,这些基因的大小在300碱基对至1700碱基对之间,鸟嘌呤与胞嘧啶(G + C)含量从中等(30%)到高(65%)。此外,我们使用该方法同时将29个突变引入单个基因。该方法成功的关键在于使用优化的寡核苷酸浓度和所用DNA聚合酶的类型。这种简化且高度可重复的方法有望对多种基因的合成有益。

相似文献

1
A modified method for PCR-directed gene synthesis from large number of overlapping oligodeoxyribonucleotides.一种从大量重叠寡脱氧核糖核苷酸进行PCR定向基因合成的改良方法。
J Biochem Biophys Methods. 2008 Apr 24;70(6):820-2. doi: 10.1016/j.jprot.2007.12.009. Epub 2008 Jan 9.
2
PCR-based accurate synthesis of long DNA sequences.基于聚合酶链式反应的长DNA序列精确合成
Nat Protoc. 2006;1(2):791-7. doi: 10.1038/nprot.2006.103.
3
A rapid and efficient method for multiple-site mutagenesis with a modified overlap extension PCR.一种采用改良重叠延伸聚合酶链反应进行多位点诱变的快速高效方法。
Appl Microbiol Biotechnol. 2005 Oct;68(6):774-8. doi: 10.1007/s00253-005-1948-8. Epub 2005 Oct 13.
4
[Assembly of apoptin gene using oligodeoxyribonucleotides in vitro].[利用寡脱氧核糖核苷酸在体外组装凋亡素基因]
Di Yi Jun Yi Da Xue Xue Bao. 2005 Feb;25(2):195-7.
5
[PCR-based assembly of the DNA sequence coding for tetanus toxin C fragment].[基于聚合酶链反应的破伤风毒素C片段编码DNA序列的组装]
Nan Fang Yi Ke Da Xue Xue Bao. 2008 Mar;28(3):363-5.
6
Simplified gene synthesis: a one-step approach to PCR-based gene construction.简化的基因合成:基于PCR的基因构建的一步法
J Biotechnol. 2006 Jul 25;124(3):496-503. doi: 10.1016/j.jbiotec.2006.01.015. Epub 2006 Mar 3.
7
TopDown real-time gene synthesis.自上而下实时基因合成
Methods Mol Biol. 2012;852:23-34. doi: 10.1007/978-1-61779-564-0_3.
8
Single-step overlap-primer-walk polymerase chain reaction for multiple mutagenesis without overlap extension.用于多重诱变且无需重叠延伸的单步重叠引物步移聚合酶链反应
Anal Biochem. 2008 Jun 1;377(1):105-7. doi: 10.1016/j.ab.2008.03.003. Epub 2008 Mar 7.
9
A direct and efficient PAGE-mediated overlap extension PCR method for gene multiple-site mutagenesis.一种用于基因多位点诱变的直接高效的聚丙烯酰胺凝胶电泳介导的重叠延伸PCR方法。
Appl Microbiol Biotechnol. 2006 Nov;73(1):234-40. doi: 10.1007/s00253-006-0583-3. Epub 2006 Oct 5.
10
New insights into the de novo gene synthesis using the automatic kinetics switch approach.利用自动动力学开关方法进行从头基因合成的新见解。
Anal Biochem. 2010 Nov 1;406(1):51-60. doi: 10.1016/j.ab.2010.06.036. Epub 2010 Jun 27.

引用本文的文献

1
Synthetic biology for the directed evolution of protein biocatalysts: navigating sequence space intelligently.定向进化蛋白质生物催化剂的合成生物学:智能导航序列空间。
Chem Soc Rev. 2015 Mar 7;44(5):1172-239. doi: 10.1039/c4cs00351a.
2
SpeedyGenes: an improved gene synthesis method for the efficient production of error-corrected, synthetic protein libraries for directed evolution.快速基因:一种改进的基因合成方法,用于高效生产经过纠错的合成蛋白质文库以进行定向进化。
Protein Eng Des Sel. 2014 Sep;27(9):273-80. doi: 10.1093/protein/gzu029. Epub 2014 Aug 9.
3
Experimental analysis of gene assembly with TopDown one-step real-time gene synthesis.
采用自上而下一步实时基因合成法进行基因组装的实验分析。
Nucleic Acids Res. 2009 Apr;37(7):e51. doi: 10.1093/nar/gkp118. Epub 2009 Mar 5.
4
Interaction of the hereditary hemochromatosis protein HFE with transferrin receptor 2 is required for transferrin-induced hepcidin expression.遗传性血色素沉着症蛋白HFE与转铁蛋白受体2的相互作用是转铁蛋白诱导的铁调素表达所必需的。
Cell Metab. 2009 Mar;9(3):217-27. doi: 10.1016/j.cmet.2009.01.010.