Sugimoto Akiko, Shiraki Mari, Hatakeyama Sachie, Saito Terumi
Laboratory of Molecular Microbiology, Department of Biological Sciences, Faculty of Science, Kanagawa University, 2946 Tsuchiya, Hiratsuka, Kanagawa 259-1293, Japan.
Antonie Van Leeuwenhoek. 2008 Aug;94(2):223-32. doi: 10.1007/s10482-008-9235-1. Epub 2008 Mar 14.
The extracellular poly(3-hydroxybutyrate) depolymerase from Ralstonia pickettii T1 has been purified, its function and character investigated in detail, and its gene cloned and sequenced. However, the mechanism by which this enzyme is secreted has not been elucidated. A mutant unable to degrade poly(3-hydroxybutyrate), N17, was obtained with the random insertion of a mini-transposon, Tn5. Western analysis using antiserum against the poly(3-hydroxybutyrate) depolymerase of Ralstonia pickettii T1, revealed that N17 accumulated the poly(3-hydroxybutyrate) depolymerase in the periplasm and cytoplasm, and did not secrete the enzyme into the external medium. It was also found that 3-hydroxybutyrate-oligomer hydrolase was secreted but inactive. The disrupted gene in N17, depO, was analyzed by Southern hybridization and its nucleotide sequence was determined. One complete open reading frame was found in the cloned 2.3-kbp DNA fragment. From a BLAST search, this gene product was found to be homologous to PulO of Ralstonia eutropha JMP134 (60% identity) and XcpA of Pseudomonas aeruginosa (60% identity). These proteins are prepilin peptidase/N-metyltransferases, a component of the Type II secretion pathway. DepO also had the four cysteines highly conserved in most prepilin peptidases at the same positions. The transcript of depO was examined by Northern hybridization using depO as a probe. In the total RNA of Ralstonia pickettii T1 in the early stationary phase, a band at 2.6-kb was detected, suggesting depO to be a functional gene. In this study, it was found that poly(3-hydroxybutyrate) depolymerase was secreted by the Type II pathway.
来自皮氏罗尔斯通氏菌T1的胞外聚(3-羟基丁酸酯)解聚酶已被纯化,对其功能和特性进行了详细研究,并且其基因已被克隆和测序。然而,该酶的分泌机制尚未阐明。通过随机插入mini-转座子Tn5获得了一个不能降解聚(3-羟基丁酸酯)的突变体N17。使用针对皮氏罗尔斯通氏菌T1的聚(3-羟基丁酸酯)解聚酶的抗血清进行的蛋白质免疫印迹分析表明,N17在周质和细胞质中积累了聚(3-羟基丁酸酯)解聚酶,并且没有将该酶分泌到外部培养基中。还发现3-羟基丁酸酯寡聚物水解酶被分泌但无活性。通过Southern杂交分析了N17中被破坏的基因depO,并确定了其核苷酸序列。在克隆的2.3-kbp DNA片段中发现了一个完整的开放阅读框。通过BLAST搜索,发现该基因产物与真养罗尔斯通氏菌JMP134的PulO(同一性为60%)和铜绿假单胞菌的XcpA(同一性为60%)同源。这些蛋白质是前菌毛蛋白肽酶/N-甲基转移酶,是II型分泌途径的一个组成部分。DepO在相同位置也具有大多数前菌毛蛋白肽酶中高度保守的四个半胱氨酸。使用depO作为探针通过Northern杂交检查depO的转录本。在稳定期早期的皮氏罗尔斯通氏菌T1的总RNA中,检测到一条2.6-kb的条带,表明depO是一个功能基因。在本研究中,发现聚(3-羟基丁酸酯)解聚酶是通过II型途径分泌的。