Shukla M K, Leszczynski Jerzy
Computational Centre for Molecular Structure and Interactions, Department of Chemistry, Jackson State University, Jackson, Mississippi 39217, USA.
J Phys Chem B. 2008 Apr 24;112(16):5139-52. doi: 10.1021/jp7100557. Epub 2008 Apr 2.
Theoretical study was performed to investigate how the degree of hydration affects the structures and properties of the canonical form (keto-N9H) of guanine in the ground and lowest singlet pipi* excited state. This work is the continuation of our earlier work where we have studied the hydration of guanine in the first solvation shell with one, three, five, and six water molecules. In the present investigation, we have considered 7-13 water molecules in hydrating guanine. Ground-state geometries were optimized at the Hartree-Fock level, whereas the configuration interaction-singles (CIS) method was used for the excited-state geometry optimization. The 6-311G(d,p) basis set was used in all calculations. The harmonic vibrational frequency analysis was used to determine the nature of the optimized ground- and excited-state potential energy surfaces; all geometries were found to be minima at the respective potential surfaces. It was found that the degree of hydration has a significant influence on the excited-state structural nonplanarity of guanine. It is expected that excited-state dynamics of guanine will depend on the degree of hydration. Ground- and excited-state geometries of selected hydrated species were also optimized in the bulk water solution using the polarizable continuum model (PCM). It was found that bulk water solution generally does not have significant influence on the structure of the hydrated species. Effects of hydration on different stretching vibrations in the ground and excited states are also discussed.
进行了理论研究,以探讨水合程度如何影响鸟嘌呤的标准形式(酮式-N9H)在基态和最低单重态ππ*激发态下的结构和性质。这项工作是我们早期工作的延续,在早期工作中我们研究了鸟嘌呤在第一溶剂化层中与一个、三个、五个和六个水分子的水合作用。在本研究中,我们考虑了7 - 13个水分子与鸟嘌呤的水合作用。基态几何结构在哈特里 - 福克水平上进行了优化,而激发态几何结构优化则使用了组态相互作用单重态(CIS)方法。所有计算均使用6 - 311G(d,p)基组。通过谐波振动频率分析来确定优化后的基态和激发态势能面的性质;发现所有几何结构在各自的势能面上均为极小值。研究发现,水合程度对鸟嘌呤的激发态结构非平面性有显著影响。预计鸟嘌呤的激发态动力学将取决于水合程度。还使用极化连续介质模型(PCM)在本体水溶液中对选定水合物种的基态和激发态几何结构进行了优化。发现本体水溶液通常对水合物种的结构没有显著影响。还讨论了水合作用对基态和激发态中不同伸缩振动的影响。