Sinha Sudarson Sekhar, Mitra Rajib Kumar, Pal Samir Kumar
Unit for Nano Science and Technology, Department of Chemical, Biological and Macromolecular Sciences, SN Bose National Centre for Basic Sciences, Block JD, Sector III, Salt Lake, Kolkata 700 098, India.
J Phys Chem B. 2008 Apr 24;112(16):4884-91. doi: 10.1021/jp709809b. Epub 2008 Apr 3.
Human serum albumin (HSA) is a soluble protein in our circulatory system, which is known to bind a variety of drugs and ligands. Since Sudlow's pioneering works on the ligand-binding sites, a major effort of the biophysical/biochemical research has been directed to characterize the structural, functional, and dynamical properties of this protein. Structural studies on HSA have revealed distinct temperature-induced folded states. Despite knowing about the ligand-binding properties and residues important for the binding, less is understood about the temperature-dependent molecular recognition of the protein. Here, we have prepared thermally induced unfolded states of the protein and characterized those by circular dichroism (CD) and differential thermal analysis (DTA) techniques. The change in the globular structure of the protein as a consequence of thermal unfolding has also been characterized by dynamic light scattering (DLS) measurements. We have used two fluorescent ligands (4-(dicyanomethylene)-2-methyl-6-(p-dimethylaminostyryl) 4H-pyran) (DCM; hydrophobic; neutral) and Nile blue (NB; cationic) of different natures to characterize the ligand-binding properties of the protein in the native and thermally unfolded states. The possible binding sites of the ligands have been characterized by competitive binding with other drug molecules having definite binding sites in HSA. Picosecond-resolved Förster resonance energy transfer (FRET) studies along with steady-state and polarization-gated spectroscopies on the ligands in the protein reveal the dynamics of the binding sites at various temperatures. From the FRET studies, an attempt has been made to characterize the simultaneous binding of the two ligands in various temperature-dependent folded states of HSA.
人血清白蛋白(HSA)是我们循环系统中的一种可溶性蛋白质,已知它能结合多种药物和配体。自从Sudlow关于配体结合位点的开创性工作以来,生物物理/生物化学研究的主要精力一直致力于表征这种蛋白质的结构、功能和动力学特性。对HSA的结构研究揭示了不同的温度诱导折叠状态。尽管了解了配体结合特性以及对结合重要的残基,但对于该蛋白质的温度依赖性分子识别了解较少。在这里,我们制备了该蛋白质的热诱导未折叠状态,并通过圆二色性(CD)和差示热分析(DTA)技术对其进行了表征。蛋白质球状结构因热解折叠而发生的变化也通过动态光散射(DLS)测量进行了表征。我们使用了两种性质不同的荧光配体(4-(二氰基亚甲基)-2-甲基-6-(对二甲氨基苯乙烯基)-4H-吡喃)(DCM;疏水性;中性)和尼罗蓝(NB;阳离子性)来表征该蛋白质在天然状态和热未折叠状态下的配体结合特性。通过与在HSA中具有确定结合位点的其他药物分子进行竞争性结合,对配体的可能结合位点进行了表征。对蛋白质中配体进行的皮秒分辨Förster共振能量转移(FRET)研究以及稳态和偏振门控光谱揭示了不同温度下结合位点的动力学。通过FRET研究,试图表征HSA在各种温度依赖性折叠状态下两种配体的同时结合情况。