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D-(+)-异甲氧基碳胸腺嘧啶核苷:单纯疱疹病毒1型胸苷激酶的高亲和力底物。

D-(+)-iso-methanocarbathymidine: a high-affinity substrate for herpes simplex virus 1 thymidine kinase.

作者信息

Comin Maria J, Vu B Christie, Boyer Paul L, Liao Chenzhong, Hughes Stephen H, Marquez Victor E

机构信息

Laboratory of Medicinal Chemistry, Center for Cancer Research, National Cancer Institute at Frederick, P.O. Box B, Building 376, Frederick, MD 21702, USA.

出版信息

ChemMedChem. 2008 Jul;3(7):1129-34. doi: 10.1002/cmdc.200800027.

DOI:10.1002/cmdc.200800027
PMID:18399509
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2727455/
Abstract

The stereoselective syntheses of the (+)-D and (-)-L enantiomers of iso-methanocarbathymidine (iso-MCT) was achieved through two independent linear approaches that converged on two antipodal enantiomers, common to a key precursor used in the synthesis of racemic iso-MCT. In the study reported herein we identified (+)-3 [D-(+)-iso-MCT] as the active enantiomer that was exclusively recognized by the herpes simplex virus 1 thymidine kinase (HSV1-tk), as was predicted by molecular modeling. For this purpose, a human osteosarcoma (HOS) cell line modified to contain and express HSV1-tk from herpes simplex virus 1 (HSV1) was used to determine the cytotoxicity of the compounds by an assay that measures the level of ATP in the cells. The work demonstrates that changes in the substitution pattern of rigid bicyclo[3.1.0]hexane nucleosides, which, relative to normal nucleosides, appear unconventional, can lead to the spatial optimization of pharmacophores and vastly improved substrate recognition.

摘要

异甲硫代胸苷(iso-MCT)的(+)-D和(-)-L对映体通过两种独立的线性合成方法实现,这两种方法汇聚于两种对映体,这两种对映体对于外消旋iso-MCT合成中使用的关键前体来说是相同的。在本文报道的研究中,我们确定(+)-3 [D-(+)-iso-MCT]为活性对映体,分子建模预测它能被单纯疱疹病毒1胸苷激酶(HSV1-tk)特异性识别。为此,使用一种经过改造以包含并表达来自单纯疱疹病毒1(HSV1)的HSV1-tk的人骨肉瘤(HOS)细胞系,通过测量细胞中ATP水平的试验来确定化合物的细胞毒性。这项工作表明,相对于正常核苷而言看似非常规的刚性双环[3.1.0]己烷核苷取代模式的变化,可导致药效团的空间优化和底物识别的极大改善。

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本文引用的文献

1
Sculpting the bicyclo[3.1.0]hexane template of carbocyclic nucleosides to improve recognition by herpes thymidine kinase.构建碳环核苷的双环[3.1.0]己烷模板以提高疱疹胸苷激酶的识别能力。
J Am Chem Soc. 2007 May 16;129(19):6216-22. doi: 10.1021/ja0688732. Epub 2007 Apr 24.
2
Understanding how the herpes thymidine kinase orchestrates optimal sugar and nucleobase conformations to accommodate its substrate at the active site: a chemical approach.了解疱疹胸苷激酶如何协调最佳的糖和核碱基构象以在活性位点容纳其底物:一种化学方法。
J Am Chem Soc. 2005 Nov 2;127(43):15145-50. doi: 10.1021/ja053789s.
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Fixed conformation nucleoside analogs effectively inhibit excision-proficient HIV-1 reverse transcriptases.固定构象核苷类似物可有效抑制具备切除功能的HIV-1逆转录酶。
J Mol Biol. 2005 Jan 21;345(3):441-50. doi: 10.1016/j.jmb.2004.10.021.
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Carbocyclic analogues of the potent cytidine deaminase inhibitor 1-(beta-D-ribofuranosyl)-1,2-dihydropyrimidin-2-one (zebularine).强效胞苷脱氨酶抑制剂1-(β-D-呋喃核糖基)-1,2-二氢嘧啶-2-酮(泽布勒林)的碳环类似物。
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