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IRF5启动子区域的单核苷酸多态性与日本人群类风湿关节炎易感性相关。

A single nucleotide polymorphism in the IRF5 promoter region is associated with susceptibility to rheumatoid arthritis in the Japanese population.

作者信息

Shimane K, Kochi Y, Yamada R, Okada Y, Suzuki A, Miyatake A, Kubo M, Nakamura Y, Yamamoto K

机构信息

Department of Allergy and Rheumatology, Graduate School of Medicine, the University of Tokyo, Tokyo, Japan.

出版信息

Ann Rheum Dis. 2009 Mar;68(3):377-83. doi: 10.1136/ard.2007.085704. Epub 2008 Apr 13.

Abstract

OBJECTIVES

Interferon regulatory factor 5 (IRF5) is a member of the IRF family of transcription factors, which regulate the production of proinflammatory cytokines. Polymorphisms in the IRF5 gene have been associated with susceptibility to systemic lupus erythaematosus (SLE) in Caucasian and Asian populations, but their involvement in other autoimmune diseases is still uncertain. Here, we assessed the genetic role of IRF5 in susceptibility to rheumatoid arthritis (RA) in Japanese subjects.

METHODS

We selected 13 single nucleotide polymorphisms (SNPs) and a CGGGG insertion-deletion polymorphism in the IRF5 gene. We performed 2 sets of case-control comparisons using Japanese subjects (first set: 830 patients with RA and 658 controls; second set: 1112 patients with RA and 940 controls), and then performed a stratified analysis using human leukocyte antigen (HLA)-DRB1 shared epitope (SE) status. We genotyped the SNPs using TaqMan assays.

RESULTS

A significant association of the rs729302 A allele with RA susceptibility was found in both sets (odds ratio (OR) 1.22, 95% CI 1.09 to 1.35, p<0.001 in the combined analysis). When the patients were stratified by the SE, the rs729302 A allele was found to confer increased risk to RA in patients that were SE negative (OR 1.50, 95% CI 1.17 to 1.92, p = 0.001) as compared with patients carrying the SE (OR 1.11, 95% CI 0.93 to 1.33, p = 0.24). In both sets, no genotyped polymorphisms were significantly associated with RA susceptibility, but rs729302 was significantly associated.

CONCLUSIONS

These findings indicate that the promoter polymorphism of IRF5 is a genetic factor conferring predisposition to RA, and that it contributes considerably to disease pathogenesis in patients that were SE negative.

摘要

目的

干扰素调节因子5(IRF5)是转录因子IRF家族的成员,可调节促炎细胞因子的产生。IRF5基因多态性与白种人和亚洲人群的系统性红斑狼疮(SLE)易感性相关,但其在其他自身免疫性疾病中的作用仍不确定。在此,我们评估了IRF5基因在日本受试者类风湿关节炎(RA)易感性中的遗传作用。

方法

我们在IRF5基因中选择了13个单核苷酸多态性(SNP)和一个CGGGG插入缺失多态性。我们使用日本受试者进行了2组病例对照比较(第一组:830例RA患者和658例对照;第二组:1112例RA患者和940例对照),然后使用人类白细胞抗原(HLA)-DRB1共享表位(SE)状态进行分层分析。我们使用TaqMan分析对SNP进行基因分型。

结果

在两组中均发现rs729302 A等位基因与RA易感性显著相关(合并分析中比值比(OR)为1.22,95%可信区间为1.09至1.35,p<0.001)。当患者按SE分层时,发现rs729302 A等位基因与携带SE的患者相比,使SE阴性患者患RA的风险增加(OR为1.50,95%可信区间为1.17至1.92,p = 0.001)(OR为1.11,95%可信区间为0.93至1.33,p = 0.24)。在两组中,没有基因分型的多态性与RA易感性显著相关,但rs729302显著相关。

结论

这些发现表明,IRF5的启动子多态性是赋予RA易感性的遗传因素,并且它对SE阴性患者的疾病发病机制有很大贡献。

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