Suppr超能文献

大肠杆菌乳糖操纵子双稳性研究的定量方法。

Quantitative approaches to the study of bistability in the lac operon of Escherichia coli.

作者信息

Santillán Moisés, Mackey Michael C

机构信息

Centro de Investigación y Estudios Avanzados del IPN, Unidad Monterrey, Parque de Investigación e Innovación Tecnológica, Apodaca, NL, Mexico.

出版信息

J R Soc Interface. 2008 Aug 6;5 Suppl 1(Suppl 1):S29-39. doi: 10.1098/rsif.2008.0086.focus.

Abstract

In this paper, the history and importance of the lac operon in the development of molecular and systems biology are briefly reviewed. We start by presenting a description of the regulatory mechanisms in this operon, taking into account the most recent discoveries. Then we offer a survey of the history of the lac operon, including the discovery of its main elements and the subsequent influence on the development of molecular and systems biology. Next the bistable behaviour of the operon is discussed, both with respect to its discovery and its molecular origin. A review of the literature in which this bistable phenomenon has been studied from a mathematical modelling viewpoint is then given. We conclude with some brief remarks.

摘要

本文简要回顾了乳糖操纵子在分子生物学和系统生物学发展历程中的历史及重要性。我们首先描述该操纵子的调控机制,并考虑到最新的发现。接着,我们概述乳糖操纵子的历史,包括其主要元件的发现以及对分子生物学和系统生物学发展的后续影响。接下来讨论操纵子的双稳态行为,包括其发现过程及其分子起源。然后给出从数学建模角度研究这一双稳态现象的文献综述。最后给出一些简要评论。

相似文献

1
Quantitative approaches to the study of bistability in the lac operon of Escherichia coli.
J R Soc Interface. 2008 Aug 6;5 Suppl 1(Suppl 1):S29-39. doi: 10.1098/rsif.2008.0086.focus.
2
In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose.
Biophys J. 2006 Oct 15;91(8):2833-43. doi: 10.1529/biophysj.105.077420. Epub 2006 Jul 28.
3
Determinants of bistability in induction of the Escherichia coli lac operon.
IET Syst Biol. 2008 Sep;2(5):293-303. doi: 10.1049/iet-syb:20080095.
4
Determining the bistability parameter ranges of artificially induced lac operon using the root locus method.
Comput Biol Med. 2015 Jun;61:75-91. doi: 10.1016/j.compbiomed.2015.03.009. Epub 2015 Mar 24.
7
Dynamics and bistability in a reduced model of the lac operon.
Chaos. 2004 Jun;14(2):279-92. doi: 10.1063/1.1689451.
8
Boolean models can explain bistability in the lac operon.
J Comput Biol. 2011 Jun;18(6):783-94. doi: 10.1089/cmb.2011.0031. Epub 2011 May 12.
9
[The establishment process of lac operon model and the analysis of several teaching problems].
Yi Chuan. 2019 Jun 20;41(6):548-563. doi: 10.16288/j.yczz.19-084.
10

引用本文的文献

2
Patterns of methylation and transcriptional plasticity during thermal acclimation in a reef-building coral.
Evol Appl. 2024 Jul 17;17(7):e13757. doi: 10.1111/eva.13757. eCollection 2024 Jul.
3
Logical regulation of endogenous gene expression using programmable, multi-input processing CRISPR guide RNAs.
Nucleic Acids Res. 2024 Aug 12;52(14):8595-8608. doi: 10.1093/nar/gkae549.
4
The impact of metabolism on the adaptation of organisms to environmental change.
Front Cell Dev Biol. 2023 Jun 12;11:1197226. doi: 10.3389/fcell.2023.1197226. eCollection 2023.
5
Microbial Production of Human Milk Oligosaccharides.
Molecules. 2023 Feb 3;28(3):1491. doi: 10.3390/molecules28031491.
7
Multiple molecular events underlie stochastic switching between 2 heritable cell states in fungi.
PLoS Biol. 2022 May 20;20(5):e3001657. doi: 10.1371/journal.pbio.3001657. eCollection 2022 May.
8
BioCRNpyler: Compiling chemical reaction networks from biomolecular parts in diverse contexts.
PLoS Comput Biol. 2022 Apr 20;18(4):e1009987. doi: 10.1371/journal.pcbi.1009987. eCollection 2022 Apr.
9
Vivarium: an interface and engine for integrative multiscale modeling in computational biology.
Bioinformatics. 2022 Mar 28;38(7):1972-1979. doi: 10.1093/bioinformatics/btac049.
10
Self-Organization and Information Processing: From Basic Enzymatic Activities to Complex Adaptive Cellular Behavior.
Front Genet. 2021 May 21;12:644615. doi: 10.3389/fgene.2021.644615. eCollection 2021.

本文引用的文献

1
Bistable behavior in a model of the lac operon in Escherichia coli with variable growth rate.
Biophys J. 2008 Mar 15;94(6):2065-81. doi: 10.1529/biophysj.107.118026. Epub 2007 Dec 7.
2
The effect of stochasticity on the lac operon: an evolutionary perspective.
PLoS Comput Biol. 2007 Jun;3(6):e111. doi: 10.1371/journal.pcbi.0030111.
3
Effect of DNA looping on the induction kinetics of the lac operon.
J Theor Biol. 2007 Aug 21;247(4):695-712. doi: 10.1016/j.jtbi.2007.03.030. Epub 2007 Mar 28.
4
Combinatorial transcriptional control of the lactose operon of Escherichia coli.
Proc Natl Acad Sci U S A. 2007 Apr 3;104(14):6043-8. doi: 10.1073/pnas.0606717104. Epub 2007 Mar 21.
5
Origin of bistability in the lac Operon.
Biophys J. 2007 Jun 1;92(11):3830-42. doi: 10.1529/biophysj.106.101717. Epub 2007 Mar 9.
6
The lactose repressor system: paradigms for regulation, allosteric behavior and protein folding.
Cell Mol Life Sci. 2007 Jan;64(1):3-16. doi: 10.1007/s00018-006-6296-z.
7
In silico evolved lac operons exhibit bistability for artificial inducers, but not for lactose.
Biophys J. 2006 Oct 15;91(8):2833-43. doi: 10.1529/biophysj.105.077420. Epub 2006 Jul 28.
8
ENZYME INDUCTION AS AN ALL-OR-NONE PHENOMENON.
Proc Natl Acad Sci U S A. 1957 Jul 15;43(7):553-66. doi: 10.1073/pnas.43.7.553.
9
Characterization of the folding landscape of monomeric lactose repressor: quantitative comparison of theory and experiment.
Proc Natl Acad Sci U S A. 2005 Oct 11;102(41):14569-74. doi: 10.1073/pnas.0505844102. Epub 2005 Oct 3.
10
Structure and mechanism of the lactose permease.
C R Biol. 2005 Jun;328(6):557-67. doi: 10.1016/j.crvi.2005.03.008.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验