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利用基因剂量效应进行全基因组筛选以鉴定海分枝杆菌巨噬细胞感染位点。

Use of gene dosage effects for a whole-genome screen to identify Mycobacterium marinum macrophage infection loci.

作者信息

Park Bonggoo, Subbian Selvakumar, El-Etr Sahar H, Cirillo Suat L G, Cirillo Jeffrey D

机构信息

Department of Microbial and Molecular Pathogenesis, Texas A&M University System Health Sciences Center, 467 Reynolds Medical Building, College Station, TX 77843-1114, USA.

出版信息

Infect Immun. 2008 Jul;76(7):3100-15. doi: 10.1128/IAI.00015-08. Epub 2008 Apr 28.

Abstract

We recently identified two loci, mel1 and mel2, that affect macrophage infection by Mycobacterium marinum. The ability of these loci to confer enhanced infection in trans is presumably due to gene dosage effects since their presence on plasmids increases expression from five- to eightfold. Reasoning that this phenomenon would allow identification of other mycobacterial genes involved in macrophage infection, we conducted a screen of an M. marinum DNA library that provides 2.6-fold coverage of the entire genome for clones that affect macrophage infection. Our preliminary screen identified 76 plasmids that carry loci affecting macrophage infection. We eliminated plasmids that do not confer the expected phenotype when retransformed (70%), that have identical physical maps (5%), or that carry either of the mel1 or mel2 loci (14%) from further consideration. Four loci that confer enhanced infection (mel) and four that confer repressed infection (mrl) of macrophages were identified, and two of each group were chosen for detailed analysis. Saturating transposon mutagenesis was used to identify the loci responsible, and M. marinum mutants were constructed in the genes involved. We expect these genes to provide insight into how mycobacteria parasitize macrophages, an important component of innate immunity.

摘要

我们最近鉴定出了两个影响海分枝杆菌巨噬细胞感染的基因座,即mel1和mel2。这些基因座在反式作用中赋予增强感染的能力可能是由于基因剂量效应,因为它们存在于质粒上会使表达增加5至8倍。考虑到这种现象将有助于鉴定其他参与巨噬细胞感染的分枝杆菌基因,我们对一个海分枝杆菌DNA文库进行了筛选,该文库对整个基因组的覆盖度为2.6倍,以寻找影响巨噬细胞感染的克隆。我们的初步筛选鉴定出了76个携带影响巨噬细胞感染基因座的质粒。我们不再进一步考虑那些重新转化时不赋予预期表型的质粒(70%)、具有相同物理图谱的质粒(5%)或携带mel1或mel2基因座之一的质粒(14%)。鉴定出了四个赋予增强感染(mel)的基因座和四个赋予抑制感染(mrl)的基因座,并从每组中选择了两个进行详细分析。使用饱和转座子诱变来鉴定相关基因座,并构建了涉及这些基因的海分枝杆菌突变体。我们期望这些基因能让我们深入了解分枝杆菌如何寄生巨噬细胞,而巨噬细胞是固有免疫的重要组成部分。

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