Suppr超能文献

甘氨酸CH2伸缩频率对构象、电离状态和氢键的依赖性。

Dependence of glycine CH2 stretching frequencies on conformation, ionization state, and hydrogen bonding.

作者信息

Bykov Sergei V, Myshakina Nataliya S, Asher Sanford A

机构信息

Department of Chemistry, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, USA.

出版信息

J Phys Chem B. 2008 May 8;112(18):5803-12. doi: 10.1021/jp710136c.

Abstract

We experimentally and theoretically examined the conformation, pH, and temperature dependence of the CH2 stretching frequencies of glycine (gly) in solution and in the crystalline state. To separate the effects of the amine and carboxyl groups on the CH2 stretching frequencies we examined the Raman spectra of 2,2,2-d3-ethylamine (CD3-CH2-NH2) and 3,3,3-d3-propionic acid (CD3-CH2-COOH) in D2O. The symmetric (nusCH2) and asymmetric (nuasCH2) stretching frequencies show a significant dependence on gly conformation. We quantified the relation between the frequency splitting (Delta = nuasCH2-nusCH2) and the xi angle which determines the gly conformational geometry. This relation allows us to determine the conformation of gly directly from the Raman spectral frequencies. We observe a large dependence of the nusCH2 and nuasCH2 frequencies on the ionization state of the amine group, which we demonstrate theoretically results from a negative hyperconjugation between the nitrogen lone pair and the C-H antibonding orbitals. The magnitude of this effect is maximized for C-H bonds trans to the nitrogen lone pair. In contrast, a small dependence of the CH2 stretching frequencies on the carboxyl group ionization state arises from delocalization of electron density from carboxyl oxygen to C-H bonding orbitals. According to our experimental observations and theoretical calculations the temperature dependence of the nusCH2 and nuasCH2 of gly is due to the change in the hydrogen-bonding strength of the amine/carboxyl groups to water.

摘要

我们通过实验和理论研究了甘氨酸(gly)在溶液和晶体状态下CH2伸缩频率的构象、pH值和温度依赖性。为了区分胺基和羧基对CH2伸缩频率的影响,我们研究了2,2,2 - d3 -乙胺(CD3 - CH2 - NH2)和3,3,3 - d3 -丙酸(CD3 - CH2 - COOH)在D2O中的拉曼光谱。对称(nusCH2)和不对称(nuasCH2)伸缩频率对甘氨酸构象有显著依赖性。我们量化了频率分裂(Delta = nuasCH2 - nusCH2)与确定甘氨酸构象几何形状的xi角之间的关系。这种关系使我们能够直接从拉曼光谱频率确定甘氨酸的构象。我们观察到nusCH2和nuasCH2频率对胺基电离状态有很大依赖性,理论证明这是由于氮孤对与C - H反键轨道之间的负超共轭作用。这种效应的大小对于与氮孤对反式的C - H键最大。相比之下,CH2伸缩频率对羧基电离状态的依赖性较小,这是由于电子密度从羧基氧离域到C - H成键轨道所致。根据我们的实验观察和理论计算,甘氨酸的nusCH2和nuasCH2的温度依赖性是由于胺基/羧基与水之间氢键强度的变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2541/2952399/1ee8230a5156/nihms239071f1.jpg

相似文献

8
Polarised IR and Raman spectra of the gamma-glycine single crystal.γ-甘氨酸单晶的偏振红外光谱和拉曼光谱。
Spectrochim Acta A Mol Biomol Spectrosc. 2005 May;61(7):1611-26. doi: 10.1016/j.saa.2004.11.064.
10
Analysis of vibrational spectra of L-alanylglycine based on density functional theory calculations.基于密度泛函理论计算的L-丙氨酰甘氨酸振动光谱分析
Spectrochim Acta A Mol Biomol Spectrosc. 2008 Nov 1;71(1):252-62. doi: 10.1016/j.saa.2007.12.019. Epub 2007 Dec 28.

本文引用的文献

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验