Paliy Oleg, Gargac Shawn M, Cheng Yugong, Uversky Vladimir N, Dunker A Keith
Department of Biochemistry and Molecular Biology, Wright State University, Dayton, Ohio 45435, USA.
J Proteome Res. 2008 Jun;7(6):2234-45. doi: 10.1021/pr800055r. Epub 2008 May 9.
We considered, on a global scale, the relationship between the predicted fraction of protein disorder and the RNA and protein expression in Escherichia coli. Fraction of protein disorder correlated positively with both measured RNA expression levels of E. coli genes in three different growth media and with predicted abundance levels of E. coli proteins. Though weak, the correlation was highly significant. Correlation of protein disorder with RNA expression did not depend on the growth rate of E. coli cultures and was not caused by a small subset of genes showing exceptionally high concordance in their disorder and expression levels. Global analysis was complemented by detailed consideration of several groups of proteins.
我们在全球范围内研究了大肠杆菌中预测的蛋白质无序比例与RNA和蛋白质表达之间的关系。蛋白质无序比例与大肠杆菌基因在三种不同生长培养基中的实测RNA表达水平以及预测的大肠杆菌蛋白质丰度水平均呈正相关。尽管相关性较弱,但高度显著。蛋白质无序与RNA表达的相关性并不取决于大肠杆菌培养物的生长速率,也不是由一小部分在无序和表达水平上表现出异常高一致性的基因所导致的。通过对几组蛋白质的详细研究对全局分析进行了补充。