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用于膜蛋白结构生物学的新型去污剂的微尺度核磁共振筛选。

Microscale NMR screening of new detergents for membrane protein structural biology.

作者信息

Zhang Qinghai, Horst Reto, Geralt Michael, Ma Xingquan, Hong Wen-Xu, Finn M G, Stevens Raymond C, Wüthrich Kurt

机构信息

Department of Molecular Biology, Department of Chemistry, Skaggs Institute for Chemical Biology, The Scripps Research Institute, 10550 North Torrey Pines Road, La Jolla, California 92037, USA.

出版信息

J Am Chem Soc. 2008 Jun 11;130(23):7357-63. doi: 10.1021/ja077863d. Epub 2008 May 14.

Abstract

The rate limiting step in biophysical characterization of membrane proteins is often the availability of suitable amounts of protein material. It was therefore of interest to demonstrate that microcoil nuclear magnetic resonance (NMR) technology can be used to screen microscale quantities of membrane proteins for proper folding in samples destined for structural studies. Micoscale NMR was then used to screen a series of newly designed zwitterionic phosphocholine detergents for their ability to reconstitute membrane proteins, using the previously well characterized beta-barrel E. coli outer membrane protein OmpX as a test case. Fold screening was thus achieved with microgram amounts of uniformly (2)H, (15)N-labeld OmpX and affordable amounts of the detergents, and prescreening with SDS-gel electrophoresis ensured efficient selection of the targets for NMR studies. A systematic approach to optimize the phosphocholine motif for membrane protein refolding led to the identification of two new detergents, 138-Fos and 179-Fos, that yield 2D [ (15)N, (1)H]-TROSY correlation NMR spectra of natively folded reconstituted OmpX.

摘要

膜蛋白生物物理特性表征中的限速步骤通常是能否获得适量的蛋白质材料。因此,证明微线圈核磁共振(NMR)技术可用于筛选微量膜蛋白,以确定其在用于结构研究的样品中是否正确折叠,这一点很有意义。然后,以先前已充分表征的β-桶状大肠杆菌外膜蛋白OmpX作为测试案例,利用微尺度NMR筛选一系列新设计的两性离子磷酸胆碱去污剂重构膜蛋白的能力。通过微克量的均匀(2)H、(15)N标记的OmpX和适量的去污剂实现了折叠筛选,并且通过SDS凝胶电泳进行预筛选确保了对用于NMR研究的靶标的有效选择。一种优化用于膜蛋白复性的磷酸胆碱基序的系统方法,导致鉴定出两种新的去污剂138-Fos和179-Fos,它们能产生天然折叠的重构OmpX的二维[(15)N,(1)H]-TROSY相关NMR谱。

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