Salka Ivette, Moulisová Vladimíra, Koblízek Michal, Jost Günter, Jürgens Klaus, Labrenz Matthias
IOW-Leibniz Institute for Baltic Sea Research, Seestrasse 15, 18119 Rostock, Germany.
Appl Environ Microbiol. 2008 Jul;74(14):4398-404. doi: 10.1128/AEM.02447-07. Epub 2008 May 23.
The abundance, vertical distribution, and diversity of aerobic anoxygenic phototrophic bacteria (AAP) were studied at four basins of the Baltic Sea. AAP were enumerated by infrared epifluorescence microscopy, and their diversity was analyzed by using pufM gene clone libraries. In addition, numbers of CFU containing the pufM gene were determined, and representative strains were isolated. Both approaches indicated that AAP reached maximal abundance in the euphotic zone. Maximal AAP abundance was 2.5 x 10(5) cells ml(-1) (11% of total prokaryotes) or 1.0 x 10(3) CFU ml(-1) (9 to 10% of total CFU). Environmental pufM clone sequences were grouped into 11 operational taxonomic units phylogenetically related to cultivated members of the Alpha-, Beta-, and Gammaproteobacteria. In spite of varying pufM compositions, five clones were present in all libraries. Of these, Jannaschia-related clones were always found in relative abundances representing 25 to 30% of the total AAP clones. The abundances of the other clones varied. Clones potentially affiliated with typical freshwater Betaproteobacteria sequences were present at three Baltic Sea stations, whereas clones grouping with Loktanella represented 40% of the total cell numbers in the Gotland Basin. For three alphaproteobacterial clones, probable pufM phylogenetic relationships were supported by 16S rRNA gene analyses of Baltic AAP isolates, which showed nearly identical pufM sequences. Our data indicate that the studied AAP assemblages represented a mixture of marine and freshwater taxa, thus characterizing the Baltic Sea as a "melting pot" of abundant, polyphyletic aerobic photoheterotrophic bacteria.
在波罗的海的四个海域研究了需氧不产氧光合细菌(AAP)的丰度、垂直分布和多样性。通过红外落射荧光显微镜对AAP进行计数,并利用pufM基因克隆文库分析其多样性。此外,还测定了含有pufM基因的菌落形成单位(CFU)数量,并分离出代表性菌株。两种方法均表明,AAP在真光层达到最大丰度。AAP的最大丰度为2.5×10⁵个细胞/毫升(占原核生物总数的11%)或1.0×10³CFU/毫升(占总CFU的9%至10%)。环境pufM克隆序列被分为11个操作分类单元,在系统发育上与α-、β-和γ-变形菌门的培养成员相关。尽管pufM组成不同,但所有文库中都存在5个克隆。其中,与詹氏菌属相关的克隆在相对丰度上始终占AAP克隆总数的25%至30%。其他克隆的丰度各不相同。在波罗的海的三个站点发现了可能与典型淡水β-变形菌序列相关的克隆,而与洛克氏菌属聚类的克隆占哥特兰盆地细胞总数的40%。对于三个α-变形菌克隆,通过对波罗的海AAP分离株的16S rRNA基因分析,支持了可能的pufM系统发育关系,结果显示pufM序列几乎相同。我们的数据表明,所研究的AAP群落代表了海洋和淡水分类群的混合,从而将波罗的海描述为丰富的、多系需氧光合异养细菌的“熔炉”。