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小鼠行为表型分析中的可靠性、稳健性和可重复性:一项跨实验室研究。

Reliability, robustness, and reproducibility in mouse behavioral phenotyping: a cross-laboratory study.

作者信息

Mandillo Silvia, Tucci Valter, Hölter Sabine M, Meziane Hamid, Banchaabouchi Mumna Al, Kallnik Magdalena, Lad Heena V, Nolan Patrick M, Ouagazzal Abdel-Mouttalib, Coghill Emma L, Gale Karin, Golini Elisabetta, Jacquot Sylvie, Krezel Wojtek, Parker Andy, Riet Fabrice, Schneider Ilka, Marazziti Daniela, Auwerx Johan, Brown Steve D M, Chambon Pierre, Rosenthal Nadia, Tocchini-Valentini Glauco, Wurst Wolfgang

机构信息

Gesellschaft für Strahlenforschungdagger-National Research Center for Environment and Health, Institute of Developmental Genetics, Neuherberg, Germany.

出版信息

Physiol Genomics. 2008 Aug 15;34(3):243-55. doi: 10.1152/physiolgenomics.90207.2008. Epub 2008 May 27.

Abstract

Establishing standard operating procedures (SOPs) as tools for the analysis of behavioral phenotypes is fundamental to mouse functional genomics. It is essential that the tests designed provide reliable measures of the process under investigation but most importantly that these are reproducible across both time and laboratories. For this reason, we devised and tested a set of SOPs to investigate mouse behavior. Five research centers were involved across France, Germany, Italy, and the UK in this study, as part of the EUMORPHIA program. All the procedures underwent a cross-validation experimental study to investigate the robustness of the designed protocols. Four inbred reference strains (C57BL/6J, C3HeB/FeJ, BALB/cByJ, 129S2/SvPas), reflecting their use as common background strains in mutagenesis programs, were analyzed to validate these tests. We demonstrate that the operating procedures employed, which includes open field, SHIRPA, grip-strength, rotarod, Y-maze, prepulse inhibition of acoustic startle response, and tail flick tests, generated reproducible results between laboratories for a number of the test output parameters. However, we also identified several uncontrolled variables that constitute confounding factors in behavioral phenotyping. The EUMORPHIA SOPs described here are an important start-point for the ongoing development of increasingly robust phenotyping platforms and their application in large-scale, multicentre mouse phenotyping programs.

摘要

建立标准操作程序(SOPs)作为行为表型分析工具是小鼠功能基因组学的基础。所设计的测试必须能够可靠地测量所研究的过程,但最重要的是,这些测试在时间和实验室之间都应具有可重复性。因此,我们设计并测试了一套用于研究小鼠行为的SOPs。作为EUMORPHIA计划的一部分,法国、德国、意大利和英国的五个研究中心参与了这项研究。所有程序都进行了交叉验证实验研究,以调查所设计方案的稳健性。分析了四种近交参考品系(C57BL/6J、C3HeB/FeJ、BALB/cByJ、129S2/SvPas),这些品系在诱变计划中用作常见背景品系,以验证这些测试。我们证明,所采用的操作程序,包括旷场实验、SHIRPA、握力测试、转棒实验、Y迷宫实验、听觉惊吓反应的前脉冲抑制和甩尾测试,在多个测试输出参数方面在不同实验室之间产生了可重复的结果。然而,我们也确定了几个未控制的变量,这些变量在行为表型分析中构成混杂因素。本文所述的EUMORPHIA SOPs是不断发展日益稳健的表型分析平台及其在大规模、多中心小鼠表型分析计划中应用的重要起点。

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