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人乳头瘤病毒16型核糖核酸加工

HPV-16 RNA processing.

作者信息

Schwartz Stefan

机构信息

Department of Medical Biochemistry and Microbiology, Uppsala University, BMC, Uppsala, Sweden.

出版信息

Front Biosci. 2008 May 1;13:5880-91. doi: 10.2741/3123.

DOI:10.2741/3123
PMID:18508629
Abstract

To understand human papillomavirus type 16 (HPV-16) gene regulation, it is necessary to understand HPV-16 RNA processing. HPV-16 encodes multiple 5'- and 3'-splice sites and two polyadenylation signals pAE and pAL (Figure 1). The major 3'-splice site on the HPV-16 genome (SA3358) is used for generation of E6, E7, E4, L1 and L2 mRNAs. It encodes a suboptimal splice signal but is under control of a strong enhancer that renders SA3358 one of the most efficiently used splice sites on the HPV-16 genome. Thereby SA3358 indirectly blocks HPV-16 late gene expression. The early polyA signal is also under control of the early UTR sequence and multiple RNA elements in the L2 coding region that interact with hnRNP H. The two splice sites SD3632 and SA5639 are used exclusively by late mRNAs and are under control of multiple splicing silencer elements. The silencers at SA5639 are located in the L1 coding region and interact with hnRNP A1. So far, only polypyrimidine tract binding protein (PTB) has been shown to induce late gene expression.

摘要

为了解人乳头瘤病毒16型(HPV - 16)的基因调控,有必要了解HPV - 16的RNA加工过程。HPV - 16编码多个5'和3'剪接位点以及两个聚腺苷酸化信号pAE和pAL(图1)。HPV - 16基因组上的主要3'剪接位点(SA3358)用于生成E6、E7、E4、L1和L2 mRNA。它编码一个次优剪接信号,但受一个强增强子的控制,这使得SA3358成为HPV - 16基因组上最有效使用的剪接位点之一。由此SA3358间接阻断HPV - 16晚期基因表达。早期聚腺苷酸化信号也受早期非翻译区序列以及L2编码区中与hnRNP H相互作用的多个RNA元件的控制。两个剪接位点SD3632和SA5639仅被晚期mRNA使用,并受多个剪接沉默子元件的控制。SA5639处的沉默子位于L1编码区并与hnRNP A1相互作用。到目前为止,只有多嘧啶序列结合蛋白(PTB)已被证明可诱导晚期基因表达。

相似文献

1
HPV-16 RNA processing.人乳头瘤病毒16型核糖核酸加工
Front Biosci. 2008 May 1;13:5880-91. doi: 10.2741/3123.
2
Eight nucleotide substitutions inhibit splicing to HPV-16 3'-splice site SA3358 and reduce the efficiency by which HPV-16 increases the life span of primary human keratinocytes.8 个核苷酸取代抑制 HPV-16 3′剪接位点 SA3358 的剪接,降低 HPV-16 延长原代人角质形成细胞寿命的效率。
PLoS One. 2013 Sep 9;8(9):e72776. doi: 10.1371/journal.pone.0072776. eCollection 2013.
3
Multiple ASF/SF2 sites in the human papillomavirus type 16 (HPV-16) E4-coding region promote splicing to the most commonly used 3'-splice site on the HPV-16 genome.人类乳头瘤病毒 16 型(HPV-16)E4 编码区中的多个 ASF/SF2 位点促进拼接至 HPV-16 基因组上最常用的 3'-拼接位点。
J Virol. 2010 Aug;84(16):8219-30. doi: 10.1128/JVI.00462-10. Epub 2010 Jun 2.
4
Polypyrimidine tract binding protein induces human papillomavirus type 16 late gene expression by interfering with splicing inhibitory elements at the major late 5' splice site, SD3632.聚嘧啶序列结合蛋白通过干扰主要晚期5'剪接位点SD3632处的剪接抑制元件来诱导人乳头瘤病毒16型晚期基因表达。
J Virol. 2008 Apr;82(7):3665-78. doi: 10.1128/JVI.02140-07. Epub 2008 Jan 23.
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hnRNP G prevents inclusion on the HPV16 L1 mRNAs of the central exon between splice sites SA3358 and SD3632.异质性核糖核蛋白G可阻止剪接位点SA3358和SD3632之间的中央外显子包含在人乳头瘤病毒16型L1信使核糖核酸中。
J Gen Virol. 2018 Mar;99(3):328-343. doi: 10.1099/jgv.0.001019.
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Identification of an hnRNP A1-dependent splicing silencer in the human papillomavirus type 16 L1 coding region that prevents premature expression of the late L1 gene.在人乳头瘤病毒16型L1编码区鉴定出一种依赖于hnRNP A1的剪接沉默子,其可防止晚期L1基因的过早表达。
J Virol. 2004 Oct;78(20):10888-905. doi: 10.1128/JVI.78.20.10888-10905.2004.
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A 57-nucleotide upstream early polyadenylation element in human papillomavirus type 16 interacts with hFip1, CstF-64, hnRNP C1/C2, and polypyrimidine tract binding protein.人乳头瘤病毒16型中一个57个核苷酸的上游早期聚腺苷酸化元件与hFip1、CstF-64、hnRNP C1/C2以及多嘧啶序列结合蛋白相互作用。
J Virol. 2005 Apr;79(7):4270-88. doi: 10.1128/JVI.79.7.4270-4288.2005.
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Identification of a 17-nucleotide splicing enhancer in HPV-16 L1 that counteracts the effect of multiple hnRNP A1-binding splicing silencers.在人乳头瘤病毒16型L1中鉴定出一个17个核苷酸的剪接增强子,其可抵消多个异质核糖核蛋白A1结合剪接沉默子的作用。
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9
A splicing enhancer in the E4 coding region of human papillomavirus type 16 is required for early mRNA splicing and polyadenylation as well as inhibition of premature late gene expression.人乳头瘤病毒16型E4编码区中的一个剪接增强子对于早期mRNA剪接和聚腺苷酸化以及抑制晚期基因过早表达是必需的。
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Suppression of HPV-16 late L1 5'-splice site SD3632 by binding of hnRNP D proteins and hnRNP A2/B1 to upstream AUAGUA RNA motifs.hnRNP D 蛋白和 hnRNP A2/B1 与上游 AUAGUA RNA 基序结合抑制 HPV-16 晚期 L1 5′剪接位点 SD3632。
Nucleic Acids Res. 2013 Dec;41(22):10488-508. doi: 10.1093/nar/gkt803. Epub 2013 Sep 5.

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