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酵母甾醇C24-甲基转移酶:通过定点诱变和热力学分析研究高度保守的酪氨酸-81在催化活性中的作用

Yeast sterol C24-methyltransferase: role of highly conserved tyrosine-81 in catalytic competence studied by site-directed mutagenesis and thermodynamic analysis.

作者信息

Nes W David, Jayasimha Pruthvi, Song Zhihong

机构信息

Department of Chemistry and Biochemistry, Texas Tech University, PO Box 1061, Lubbock, TX 79409-1061, USA.

出版信息

Arch Biochem Biophys. 2008 Sep 15;477(2):313-23. doi: 10.1016/j.abb.2008.05.016. Epub 2008 Jun 12.

Abstract

The role of Try-81 in the reaction catalyzed by Saccharomyces cerevisiae sterol 24-C-methyltransferase (Erg6p) was investigated kinetically and for product differences against a panel of position-81 mutants in which Tyr was substituted with Trp, Phe, Ile, Leu, Val and Ala. The residue chosen for mutation is one that was reported previously to accept fecosterol and yield a set 24-ethyl (idene) sterol products typical of plants, showing the amino acid residue is located close to the transient C25 carbocation intermediate in the active site. One group of mutants (aromatic) tested with the natural substrate zymosterol accelerated the C-methylation reaction (k(cat)/K(m)) whereas the other group of mutants (aliphatics) decreased catalytic competence as the amino acid side chain was downsized. Mutating to aromatic and assaying with the substrate analog designed as a suicide substrate 26,27-dehydrozymosterol favored C26-monol formation, whereas mutating to the aliphatic of smaller size favored C26-diol formation (a measure of enzyme alkylation). In no case was zymosterol converted to an intermediate that formed a C25-diol. Thermodynamic analysis (determination of E(a), DeltaG(double dagger), DeltaH(double dagger) and TDeltaS(double dagger)) for the C-methylation reaction performed by these enzymes assayed with the substrate and its analog or zymosterol paired with the "charged' high energy intermediate (HEI) analogs 24(R,S)25,epiminolanosterol and 25-azalanosterol or "neutral" membrane insert ergosterol showed that mutation to aromatics can reduce inhibitor potency (measured as K(m)/K(i)), yet catalysis can improve in Trp81 by the introduction of a gain in free energy associated with stabilization of the transition state of a rate-controlling step directed toward turnover. Alternatively, mutation to the smaller aliphatic amino acid side chains led to a destabilization in the active site structure which was accompanied by increases in the partition ratios associated with abortive complex formation. The results are explained by consideration of the functional differences attributed to Tyr81 substitution to aromatics and aliphatics of different size involved with cation-pi or hydrogen bonding interactions and in the activation barriers required of differing side chain conformations to orient the reactants in the direction of turnover versus enzyme inactivation.

摘要

对酿酒酵母甾醇24 - C - 甲基转移酶(Erg6p)催化反应中Try - 81的作用进行了动力学研究,并针对一组81位突变体(其中Tyr被Trp、Phe、Ile、Leu、Val和Ala取代)研究了产物差异。选择进行突变的残基是先前报道的能接受粪甾醇并产生一组典型植物的24 - 乙基(亚乙基)甾醇产物的残基,这表明该氨基酸残基位于活性位点中靠近瞬时C25碳正离子中间体的位置。用天然底物酵母甾醇测试的一组突变体(芳香族)加速了C - 甲基化反应(k(cat)/K(m)),而另一组突变体(脂肪族)随着氨基酸侧链变小催化能力下降。突变为芳香族并用设计为自杀底物的底物类似物26,27 - 脱氢酵母甾醇进行测定有利于C26 - 单醇形成,而突变为较小尺寸的脂肪族则有利于C26 - 二醇形成(酶烷基化的一种度量)。在任何情况下,酵母甾醇都不会转化为形成C25 - 二醇的中间体。用底物及其类似物或酵母甾醇与“带电”高能中间体(HEI)类似物24(R,S)25 - 表氨基羊毛甾醇和25 - 氮杂羊毛甾醇或“中性”膜插入物麦角甾醇对这些酶进行C - 甲基化反应的热力学分析(测定E(a)、ΔG(双 dagger)、ΔH(双 dagger)和TDeltaS(双 dagger))表明,突变为芳香族可降低抑制剂效力(以K(m)/K(i)衡量),但通过引入与指向周转的速率控制步骤的过渡态稳定相关的自由能增加,Trp81处的催化作用可得到改善。或者,突变为较小的脂肪族氨基酸侧链会导致活性位点结构不稳定,这伴随着与无效复合物形成相关的分配比增加。通过考虑归因于Tyr81被不同大小的芳香族和脂肪族取代的功能差异来解释这些结果,这些差异涉及阳离子 - π或氢键相互作用以及不同侧链构象将反应物定向到周转方向与酶失活方向所需的活化能垒。

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