• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

功能磁共振成像中运动校正与生理噪声回归的整合

Integration of motion correction and physiological noise regression in fMRI.

作者信息

Jones Tyler B, Bandettini Peter A, Birn Rasmus M

机构信息

Laboratory of Brain and Cognition, National Institute of Mental Health, NIH, Bethesda, MD 20892-1148, USA.

出版信息

Neuroimage. 2008 Aug 15;42(2):582-90. doi: 10.1016/j.neuroimage.2008.05.019. Epub 2008 May 21.

DOI:10.1016/j.neuroimage.2008.05.019
PMID:18583155
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2833099/
Abstract

Physiological fluctuations resulting from the heart beat and respiration are a dominant source of noise in fMRI, particularly at high field strengths. Commonly used physiological noise correction techniques, such as RETROspective Image CORrection (RETROICOR), rely critically on the timing of the image acquisition relative to the heart beat, but do not account for the effects of subject motion. Such motion affects the fluctuation amplitude, yet volume registration can distort the timing information. In this study, we aimed to systematically determine the optimal order of volume registration, slice-time correction and RETROICOR in their traditional forms. In addition, we evaluate the sensitivity of RETROICOR to timing errors introduced by the slice acquisition, and we develop a new method of accounting for timing errors introduced by volume registration into physiological correction (motion-modified RETROICOR). Both simulation and resting data indicate that the temporal standard deviation is reduced most by performing volume registration before RETROICOR and slice-time correction after RETROCIOR. While simulations indicate that physiological noise correction with regressors constructed on a slice-by-slice basis more accurately modeled physiological noise compared to using the same regressors for the entire volume, the difference between these regression techniques in subject data was minimal. The motion-modified RETROICOR showed marked improvement in simulations with varying amounts of subject motion, reducing the temporal standard deviation by up to 36% over the traditional RETROICOR. Though to a lesser degree than in simulation, the motion-modified RETROICOR performed better in nearly every voxel in the brain in both high- and low-resolution subject data.

摘要

由心跳和呼吸引起的生理波动是功能磁共振成像(fMRI)中主要的噪声源,在高场强下尤为明显。常用的生理噪声校正技术,如回顾性图像校正(RETROICOR),严重依赖于图像采集相对于心跳的时间,但没有考虑受试者运动的影响。这种运动会影响波动幅度,而体积配准会扭曲时间信息。在本研究中,我们旨在系统地确定传统形式下体积配准、切片时间校正和RETROICOR的最佳顺序。此外,我们评估了RETROICOR对切片采集引入的时间误差的敏感性,并开发了一种新方法,将体积配准引入的时间误差纳入生理校正(运动修正的RETROICOR)。模拟和静息数据均表明,在RETROICOR之前进行体积配准,在RETROCIOR之后进行切片时间校正,可最大程度地降低时间标准差。虽然模拟表明,与对整个体积使用相同的回归变量相比,基于逐片构建的回归变量进行生理噪声校正能更准确地模拟生理噪声,但在受试者数据中,这些回归技术之间的差异很小。在不同程度的受试者运动模拟中,运动修正的RETROICOR表现出显著改善,与传统RETROICOR相比,时间标准差降低了36%。尽管程度不如模拟中明显,但在高分辨率和低分辨率受试者数据中,运动修正的RETROICOR在大脑几乎每个体素中的表现都更好。

相似文献

1
Integration of motion correction and physiological noise regression in fMRI.功能磁共振成像中运动校正与生理噪声回归的整合
Neuroimage. 2008 Aug 15;42(2):582-90. doi: 10.1016/j.neuroimage.2008.05.019. Epub 2008 May 21.
2
Removing motion and physiological artifacts from intrinsic BOLD fluctuations using short echo data.利用短回波数据去除自发脑活动的运动和生理伪影。
Neuroimage. 2013 Jan 1;64(6):526-37. doi: 10.1016/j.neuroimage.2012.09.043. Epub 2012 Sep 21.
3
Physiological denoising of BOLD fMRI data using Regressor Interpolation at Progressive Time Delays (RIPTiDe) processing of concurrent fMRI and near-infrared spectroscopy (NIRS).使用渐进时间延迟的回归器插值(RIPTiDe)处理同时进行的功能磁共振成像(fMRI)和近红外光谱(NIRS)对 BOLD fMRI 数据进行生理去噪。
Neuroimage. 2012 Apr 15;60(3):1913-23. doi: 10.1016/j.neuroimage.2012.01.140. Epub 2012 Feb 9.
4
Spin saturation artifact correction using slice-to-volume registration motion estimates for fMRI time series.使用针对功能磁共振成像时间序列的切片到体积配准运动估计进行自旋饱和伪影校正。
Med Phys. 2008 Feb;35(2):424-34. doi: 10.1118/1.2826555.
5
Effects of model-based physiological noise correction on default mode network anti-correlations and correlations.基于模型的生理噪声校正对默认模式网络反相关和相关性的影响。
Neuroimage. 2009 Oct 1;47(4):1448-59. doi: 10.1016/j.neuroimage.2009.05.012. Epub 2009 May 14.
6
Real-time fMRI processing with physiological noise correction - Comparison with off-line analysis.具有生理噪声校正的实时功能磁共振成像处理——与离线分析的比较。
J Neurosci Methods. 2015 Dec 30;256:117-21. doi: 10.1016/j.jneumeth.2015.08.033. Epub 2015 Sep 4.
7
Optimizing RetroICor and RetroKCor corrections for multi-shot 3D FMRI acquisitions.优化用于多次三维功能磁共振成像采集的回顾性图像相关运动校正(RetroICor)和回顾性心脏运动校正(RetroKCor)
Neuroimage. 2014 Jan 1;84:394-405. doi: 10.1016/j.neuroimage.2013.08.062. Epub 2013 Sep 7.
8
Phase vs. magnitude information in functional magnetic resonance imaging time series: toward understanding the noise.功能磁共振成像时间序列中的相位与幅度信息:探索噪声的奥秘
Magn Reson Imaging. 2009 Oct;27(8):1046-57. doi: 10.1016/j.mri.2009.02.006. Epub 2009 Apr 15.
9
Improved map-slice-to-volume motion correction with B0 inhomogeneity correction: validation of activation detection algorithms using ROC curve analyses.结合B0不均匀性校正的改进型地图切片到体积运动校正:使用ROC曲线分析对激活检测算法进行验证
Med Image Comput Comput Assist Interv. 2006;9(Pt 2):276-83. doi: 10.1007/11866763_34.
10
PHYCAA: data-driven measurement and removal of physiological noise in BOLD fMRI.PHYCAA:基于数据驱动的 BOLD fMRI 中生理噪声的测量和去除。
Neuroimage. 2012 Jan 16;59(2):1299-314. doi: 10.1016/j.neuroimage.2011.08.021. Epub 2011 Aug 16.

引用本文的文献

1
Denoising physiological data collected during multi-band, multi-echo EPI sequences.对在多频段、多回波EPI序列期间采集的生理数据进行去噪。
Apert Neuro. 2023;3. doi: 10.52294/001c.87572. Epub 2023 Aug 28.
2
Comparing data-driven physiological denoising approaches for resting-state fMRI: implications for the study of aging.比较用于静息态功能磁共振成像的数据驱动生理去噪方法:对衰老研究的启示
Front Neurosci. 2024 Feb 6;18:1223230. doi: 10.3389/fnins.2024.1223230. eCollection 2024.
3
The Role of Blood Oxygen Level Dependent Signal Variability in Pediatric Neuroscience: A Systematic Review.血氧水平依赖信号变异性在儿科神经科学中的作用:一项系统综述。
Life (Basel). 2023 Jul 19;13(7):1587. doi: 10.3390/life13071587.
4
fMRI studies evaluating central respiratory control in humans.评估人类中枢呼吸控制的 fMRI 研究。
Front Neural Circuits. 2022 Sep 23;16:982963. doi: 10.3389/fncir.2022.982963. eCollection 2022.
5
Functional magnetic resonance imaging responses during perceptual decision-making at 3 and 7 T in human cortex, striatum, and brainstem.在人类大脑皮层、纹状体和脑干中,在 3 和 7 T 下进行感知决策时的功能磁共振成像反应。
Hum Brain Mapp. 2022 Mar;43(4):1265-1279. doi: 10.1002/hbm.25719. Epub 2021 Nov 23.
6
Bring the Noise: Reconceptualizing Spontaneous Neural Activity.带来噪音:重新概念化自发神经活动。
Trends Cogn Sci. 2020 Sep;24(9):734-746. doi: 10.1016/j.tics.2020.06.003. Epub 2020 Jun 27.
7
Facilitating open-science with realistic fMRI simulation: validation and application.利用逼真的功能磁共振成像模拟促进开放科学:验证与应用
PeerJ. 2020 Feb 19;8:e8564. doi: 10.7717/peerj.8564. eCollection 2020.
8
Impact of physiological noise in characterizing the functional MRI default-mode network in Alzheimer's disease.阿尔茨海默病中功能磁共振成像默认模式网络特征的生理噪声影响。
J Cereb Blood Flow Metab. 2021 Jan;41(1):166-181. doi: 10.1177/0271678X19897442. Epub 2020 Feb 18.
9
The Benefit of Slice Timing Correction in Common fMRI Preprocessing Pipelines.常见功能磁共振成像预处理流程中切片时间校正的益处
Front Neurosci. 2019 Aug 20;13:821. doi: 10.3389/fnins.2019.00821. eCollection 2019.
10
Spatial Patterns of Brain Activity Preferentially Reflecting Transient Pain and Stimulus Intensity.空间模式的大脑活动优先反映短暂的疼痛和刺激强度。
Cereb Cortex. 2019 May 1;29(5):2211-2227. doi: 10.1093/cercor/bhz026.

本文引用的文献

1
Physiological noise modelling for spinal functional magnetic resonance imaging studies.用于脊柱功能磁共振成像研究的生理噪声建模
Neuroimage. 2008 Jan 15;39(2):680-92. doi: 10.1016/j.neuroimage.2007.09.018. Epub 2007 Sep 20.
2
An adaptive filter for suppression of cardiac and respiratory noise in MRI time series data.一种用于抑制MRI时间序列数据中心脏和呼吸噪声的自适应滤波器。
Neuroimage. 2006 Dec;33(4):1072-81. doi: 10.1016/j.neuroimage.2006.08.006. Epub 2006 Sep 29.
3
Prospective real-time slice-by-slice motion correction for fMRI in freely moving subjects.自由移动受试者功能磁共振成像的前瞻性实时逐片运动校正
MAGMA. 2006 May;19(2):55-61. doi: 10.1007/s10334-006-0027-1. Epub 2006 May 9.
4
Separating respiratory-variation-related fluctuations from neuronal-activity-related fluctuations in fMRI.在功能磁共振成像中分离与呼吸变化相关的波动和与神经元活动相关的波动。
Neuroimage. 2006 Jul 15;31(4):1536-48. doi: 10.1016/j.neuroimage.2006.02.048. Epub 2006 Apr 24.
5
Non-white noise in fMRI: does modelling have an impact?功能磁共振成像中的非白噪声:建模有影响吗?
Neuroimage. 2006 Jan 1;29(1):54-66. doi: 10.1016/j.neuroimage.2005.07.005. Epub 2005 Aug 11.
6
Variability in time delay between two models of pulse oximeters for deriving the photoplethysmographic signals.两种用于获取光电容积脉搏波信号的脉搏血氧仪模型之间时间延迟的变异性。
Physiol Meas. 2005 Aug;26(4):531-44. doi: 10.1088/0967-3334/26/4/017. Epub 2005 May 10.
7
Resting fluctuations in arterial carbon dioxide induce significant low frequency variations in BOLD signal.动脉血二氧化碳的静息波动会引起血氧水平依赖(BOLD)信号显著的低频变化。
Neuroimage. 2004 Apr;21(4):1652-64. doi: 10.1016/j.neuroimage.2003.11.025.
8
Variation of BOLD hemodynamic responses across subjects and brain regions and their effects on statistical analyses.受试者和脑区之间血氧水平依赖性功能磁共振成像血流动力学反应的变化及其对统计分析的影响。
Neuroimage. 2004 Apr;21(4):1639-51. doi: 10.1016/j.neuroimage.2003.11.029.
9
A general statistical analysis for fMRI data.功能磁共振成像数据的一般统计分析。
Neuroimage. 2002 Jan;15(1):1-15. doi: 10.1006/nimg.2001.0933.
10
Physiological noise in oxygenation-sensitive magnetic resonance imaging.氧合敏感磁共振成像中的生理噪声
Magn Reson Med. 2001 Oct;46(4):631-7. doi: 10.1002/mrm.1240.