Chitayat Seth, Adams Jarrett J, Furness Heather S T, Bayer Edward A, Smith Steven P
Department of Biochemistry, Queen's University, Kingston, Ontario, Canada K7L 3N6.
J Mol Biol. 2008 Sep 19;381(5):1202-12. doi: 10.1016/j.jmb.2008.06.050. Epub 2008 Jun 24.
The genome of the opportunistic pathogen Clostridium perfringens encodes a large number of secreted glycoside hydrolases. Their predicted activities indicate that they are involved in the breakdown of complex carbohydrates and other glycans found in the mucosal layer of the human gastrointestinal tract, within the extracellular matrix, and on the surface of host cells. One such group of these enzymes is the family 84 glycoside hydrolases, which has predicted hyaluronidase activity and comprises five members [C. perfringens glycoside hydrolase family 84 (CpGH84) A-E]. The first identified member, CpGH84A, corresponds to the mu-toxin whose modular architecture includes an N-terminal catalytic domain, four family 32 carbohydrate-binding modules, three FIVAR modules of unknown function, and a C-terminal putative calcium-binding module. Here, we report the solution NMR structure of the C-terminal modular pair from the mu-toxin. The three-helix bundle FIVAR module displays structural homology to a heparin-binding module within the N-terminal of the a C protein from group B Streptoccocus. The C-terminal module has a typical calcium-binding dockerin fold comprising two anti-parallel helices that form a planar face with EF-hand calcium-binding loops at opposite ends of the module. The size of the helical face of the mu-toxin dockerin module is approximately equal to the planar region recently identified on the surface of a cohesin-like X82 module of CpGH84C. Size-exclusion chromatography and heteronuclear NMR-based chemical shift mapping studies indicate that the helical face of the dockerin module recognizes the CpGH84C X82 module. These studies represent the structural characterization of a noncellulolytic dockerin module and its interaction with a cohesin-like X82 module. Dockerin/X82-mediated enzyme complexes may have important implications in the pathogenic properties of C. perfringens.
机会致病菌产气荚膜梭菌的基因组编码大量分泌型糖苷水解酶。其预测活性表明,它们参与了人类胃肠道黏膜层、细胞外基质以及宿主细胞表面发现的复杂碳水化合物和其他聚糖的分解。其中一组这样的酶是84家族糖苷水解酶,其具有预测的透明质酸酶活性,由五个成员组成[产气荚膜梭菌糖苷水解酶84家族(CpGH84)A - E]。第一个被鉴定的成员CpGH84A对应于μ毒素,其模块化结构包括一个N端催化结构域、四个32家族碳水化合物结合模块、三个功能未知的FIVAR模块以及一个C端假定的钙结合模块。在此,我们报道了μ毒素C端模块化对的溶液核磁共振结构。三螺旋束FIVAR模块与B组链球菌a C蛋白N端的肝素结合模块具有结构同源性。C端模块具有典型的钙结合dockerin折叠,由两个反平行螺旋组成,形成一个平面,在模块相对两端有EF手型钙结合环。μ毒素dockerin模块螺旋面的大小大约等于最近在CpGH84C的类黏附素X82模块表面鉴定出的平面区域。尺寸排阻色谱和基于异核核磁共振的化学位移映射研究表明,dockerin模块的螺旋面识别CpGH84C X82模块。这些研究代表了非纤维素分解dockerin模块及其与类黏附素X82模块相互作用的结构表征。Dockerin/X82介导的酶复合物可能对产气荚膜梭菌的致病特性具有重要意义。