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过氧化氢酶-过氧化物酶中严格保守的Y111的替换:远程结构域间接触对活性位点结构和催化性能的影响。

Substitution of strictly conserved Y111 in catalase-peroxidases: Impact of remote interdomain contacts on active site structure and catalytic performance.

作者信息

Moore Robert L, Cook Carma O, Williams Rachel, Goodwin Douglas C

机构信息

Department of Chemistry and Biochemistry, Auburn University, AL 36849, United States.

出版信息

J Inorg Biochem. 2008 Sep;102(9):1819-24. doi: 10.1016/j.jinorgbio.2008.06.002. Epub 2008 Jun 13.

Abstract

Catalase-peroxidase function is strictly dependent on a gene-duplicated C-terminal domain. This domain no longer has a functioning active site, but from 25 to 30A away it is essential for preventing the coordination of an active site base (His106) to the heme. The mechanisms by which this distant structure supports active site function have not yet been elucidated. Tyr111 is a strictly conserved member of an interdomain H-bonding network that supports the loop connecting the N-terminal B (bearing His106) and C helices. Spectroscopic evaluation of the Tyr111Ala variant of KatG showed a substantial increase in hexa-coordinate low-spin heme, giving it the appearance of a transition between the wild type (primarily high-spin) and the N-terminal domain alone (pure low-spin). Concomitant with the spectral changes was decreased activity compared to the wild type enzyme, suggesting that Tyr111 does have a role in preventing His106 coordination. Substitution of Tyr111 diminishes catalase activity more substantially than peroxidase activity. Such an effect cannot be explained by His106 coordination alone, suggesting that these interdomain interactions may help tune the catalase-peroxidase active site for bifunctionality.

摘要

过氧化氢酶 - 过氧化物酶功能严格依赖于基因复制的C末端结构域。该结构域不再具有起作用的活性位点,但在距离活性位点25至30埃处,它对于防止活性位点碱基(His106)与血红素配位至关重要。这种远距离结构支持活性位点功能的机制尚未阐明。Tyr111是域间氢键网络中一个严格保守的成员,该网络支持连接N末端B(带有His106)和C螺旋的环。对KatG的Tyr111Ala变体的光谱评估显示,六配位低自旋血红素大幅增加,使其呈现出野生型(主要是高自旋)和单独的N末端结构域(纯低自旋)之间的转变外观。与光谱变化相伴的是,与野生型酶相比活性降低,这表明Tyr111确实在防止His106配位中起作用。Tyr111的取代对过氧化氢酶活性的降低比对过氧化物酶活性的降低更显著。这种效应不能仅用His106配位来解释,这表明这些域间相互作用可能有助于调节过氧化氢酶 - 过氧化物酶活性位点的双功能性。

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