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色氨酸合酶,一种变构分子工厂。

Tryptophan synthase, an allosteric molecular factory.

作者信息

Barends Thomas R M, Dunn Michael F, Schlichting Ilme

机构信息

Max Planck Institute for Medical Research, Department of Biomolecular Mechanisms, D-69120 Heidelberg, Germany.

出版信息

Curr Opin Chem Biol. 2008 Oct;12(5):593-600. doi: 10.1016/j.cbpa.2008.07.011.

DOI:10.1016/j.cbpa.2008.07.011
PMID:18675375
Abstract

Tryptophan synthase (TrpS) is a pyridoxal phosphate-containing bifunctional enzyme that catalyzes the last two steps in the biosynthesis of L-tryptophan. Indole, an intermediate generated at the active site of the alpha-subunit is channeled via a 25 A long tunnel to the beta-active site where it reacts with an aminoacrylate intermediate derived from L-serine. The two reactions are kept in phase by allosteric interactions between the two subunits. The recent development of novel alpha-site ligands and alpha-reaction transition state analogs combined with kinetic and crystal structure analysis of Salmonella typhimurium tryptophan synthase has provided new insights into the allosteric regulation of substrate channeling, the reaction mechanisms of the alpha and beta active sites, and the influence of structural dynamics.

摘要

色氨酸合酶(TrpS)是一种含磷酸吡哆醛的双功能酶,催化L-色氨酸生物合成的最后两步。吲哚是在α亚基活性位点产生的中间体,通过一条25埃长的通道输送到β活性位点,在那里它与源自L-丝氨酸的氨基丙烯酸酯中间体反应。这两个反应通过两个亚基之间的变构相互作用保持同步。新型α位点配体和α反应过渡态类似物的最新进展,结合鼠伤寒沙门氏菌色氨酸合酶的动力学和晶体结构分析,为底物通道的变构调节、α和β活性位点的反应机制以及结构动力学的影响提供了新的见解。

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1
Tryptophan synthase, an allosteric molecular factory.色氨酸合酶,一种变构分子工厂。
Curr Opin Chem Biol. 2008 Oct;12(5):593-600. doi: 10.1016/j.cbpa.2008.07.011.
2
Allosteric regulation of substrate channeling in tryptophan synthase: modulation of the L-serine reaction in stage I of the beta-reaction by alpha-site ligands.色氨酸合成酶中底物通道化的变构调节:α位点配体对β反应第一阶段L-丝氨酸反应的调节。
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The reaction of indole with the aminoacrylate intermediate of Salmonella typhimurium tryptophan synthase: observation of a primary kinetic isotope effect with 3-[(2)H]indole.吲哚与鼠伤寒沙门氏菌色氨酸合酶的氨基丙烯酸酯中间体的反应:用3-[(2)H]吲哚观察一级动力学同位素效应。
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Cooperative fluctuations and subunit communication in tryptophan synthase.色氨酸合酶中的协同涨落与亚基通讯
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Tryptophan synthase: the workings of a channeling nanomachine.色氨酸合酶:一种通道化纳米机器的运作机制
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Allosteric regulation of tryptophan synthase channeling: the internal aldimine probed by trans-3-indole-3'-acrylate binding.色氨酸合酶通道化的变构调节:通过反式-3-吲哚-3'-丙烯酸酯结合对内部醛亚胺的研究。
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8
Crystal structures of a mutant (betaK87T) tryptophan synthase alpha2beta2 complex with ligands bound to the active sites of the alpha- and beta-subunits reveal ligand-induced conformational changes.一种突变体(βK87T)色氨酸合酶α2β2复合物的晶体结构,其配体与α亚基和β亚基的活性位点结合,揭示了配体诱导的构象变化。
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Allosteric regulation of tryptophan synthase: effects of pH, temperature, and alpha-subunit ligands on the equilibrium distribution of pyridoxal 5'-phosphate-L-serine intermediates.色氨酸合酶的变构调节:pH、温度及α亚基配体对磷酸吡哆醛-L-丝氨酸中间体平衡分布的影响
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Loop closure and intersubunit communication in tryptophan synthase.色氨酸合酶中的环闭合与亚基间通讯
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