Abergel Rebecca J, Clifton Matthew C, Pizarro Juan C, Warner Jeffrey A, Shuh David K, Strong Roland K, Raymond Kenneth N
Department of Chemistry, University of California, Berkeley, California 94720-1460, USA.
J Am Chem Soc. 2008 Aug 27;130(34):11524-34. doi: 10.1021/ja803524w. Epub 2008 Aug 5.
The siderophore enterobactin (Ent) is produced by enteric bacteria to mediate iron uptake. Ent scavenges iron and is taken up by the bacteria as the highly stable ferric complex [Fe (III)(Ent)] (3-). This complex is also a specific target of the mammalian innate immune system protein, Siderocalin (Scn), which acts as an antibacterial agent by specifically sequestering siderophores and their ferric complexes during infection. Recent literature suggesting that Scn may also be involved in cellular iron transport has increased the importance of understanding the mechanism of siderophore interception and clearance by Scn; Scn is observed to release iron in acidic endosomes and [Fe (III)(Ent)] (3-) is known to undergo a change from catecholate to salicylate coordination in acidic conditions, which is predicted to be sterically incompatible with the Scn binding pocket (also referred to as the calyx). To investigate the interactions between the ferric Ent complex and Scn at different pH values, two recombinant forms of Scn with mutations in three residues lining the calyx were prepared: Scn-W79A/R81A and Scn-Y106F. Binding studies and crystal structures of the Scn-W79A/R81A:[Fe (III)(Ent)] (3-) and Scn-Y106F:[Fe (III)(Ent)] (3-) complexes confirm that such mutations do not affect the overall conformation of the protein but do weaken significantly its affinity for [Fe (III)(Ent)] (3-). Fluorescence, UV-vis, and EXAFS spectroscopies were used to determine Scn/siderophore dissociation constants and to characterize the coordination mode of iron over a wide pH range, in the presence of both mutant proteins and synthetic salicylate analogues of Ent. While Scn binding hinders salicylate coordination transformation, strong acidification results in the release of iron and degraded siderophore. Iron release may therefore result from a combination of Ent degradation and coordination change.
铁载体肠杆菌素(Ent)由肠道细菌产生,用于介导铁的摄取。Ent螯合铁,并以高度稳定的铁复合物Fe(III)(Ent)的形式被细菌摄取。这种复合物也是哺乳动物先天免疫系统蛋白——铁调素(Scn)的特异性靶标,铁调素在感染期间通过特异性螯合铁载体及其铁复合物发挥抗菌作用。最近的文献表明,Scn可能也参与细胞铁转运,这增加了理解Scn拦截和清除铁载体机制的重要性;据观察,Scn在酸性内体中释放铁,并且已知Fe(III)(Ent)在酸性条件下会从儿茶酚盐配位转变为水杨酸盐配位,预计这在空间上与Scn结合口袋(也称为萼)不相容。为了研究不同pH值下铁Ent复合物与Scn之间的相互作用,制备了两种在萼内衬的三个残基处有突变的Scn重组形式:Scn-W79A/R81A和Scn-Y106F。Scn-W79A/R81A:Fe(III)(Ent)和Scn-Y106F:Fe(III)(Ent)复合物的结合研究和晶体结构证实,此类突变不会影响蛋白质的整体构象,但会显著削弱其对Fe(III)(Ent)的亲和力。在存在突变蛋白和Ent的合成水杨酸盐类似物的情况下,利用荧光、紫外可见和扩展X射线吸收精细结构光谱来确定Scn/铁载体解离常数,并在很宽的pH范围内表征铁的配位模式。虽然Scn结合会阻碍水杨酸盐配位转变,但强酸化会导致铁的释放和铁载体降解。因此,铁的释放可能是Ent降解和配位变化共同作用的结果。