Francis Kevin, Gadda Giovanni
Department of Chemistry, Georgia State University, Atlanta, Georgia 30302-4098, USA.
Biochemistry. 2008 Sep 2;47(35):9136-44. doi: 10.1021/bi801013e. Epub 2008 Aug 9.
The deprotonation of nitroethane catalyzed by Neurospora crassa 2-nitropropane dioxygenase was investigated by measuring the formation and release of ethylnitronate formed in turnover as a function of pH and through mutagenesis studies. Progress curves for the enzymatic reaction obtained by following the increase in absorbance at 228 nm over time were visibly nonlinear, requiring a logarithmic approximation of the initial reaction rates for the determination of the kinetic parameters of the enzyme. The pH dependence of the second-order rate constant k cat/ K m with nitroethane as substrate implicates the presence of a group with a p K a of 8.1 +/- 0.1 that must be unprotonated for nitronate formation. Mutagenesis studies suggest that this group is histidine 196 as evident from the inability of a H196N variant form of the enzyme to catalyze the formation of ethylnitronate from nitroethane. Replacement of histidine 196 with asparagine resulted in an approximately 15-fold increase in the k cat/ K m with ethylnitronate as compared to the wild-type, which results from the inability of the mutant enzyme to undergo nonoxidative turnover. The results presented herein are consistent with a branched catalytic mechanism for the enzyme in which the ethylnitronate intermediate formed from the H196-catalyzed deprotonation of nitroethane partitions between release from the active site and oxidative denitrification to yield acetaldehyde and nitrite.
通过测量作为pH函数的周转过程中形成并释放的亚硝酸乙酯以及通过诱变研究,对粗糙脉孢菌2-硝基丙烷双加氧酶催化的硝基乙烷去质子化进行了研究。通过跟踪228 nm处吸光度随时间的增加而获得的酶促反应进程曲线明显是非线性的,这需要对初始反应速率进行对数近似以确定酶的动力学参数。以硝基乙烷为底物时,二级速率常数kcat/Km对pH的依赖性表明存在一个pKa为8.1±0.1的基团,该基团必须未质子化才能形成亚硝酸酯。诱变研究表明,这个基团是组氨酸196,从该酶的H196N变体形式无法催化由硝基乙烷形成亚硝酸乙酯可以明显看出。用天冬酰胺取代组氨酸196导致以亚硝酸乙酯为底物时kcat/Km比野生型增加约15倍,这是由于突变酶无法进行非氧化周转所致。本文给出的结果与该酶的分支催化机制一致,其中由H196催化的硝基乙烷去质子化形成的亚硝酸乙酯中间体在从活性位点释放和氧化反硝化以产生乙醛和亚硝酸盐之间进行分配。