Bonetti Cosimo, Mathes Tilo, van Stokkum Ivo H M, Mullen Katharine M, Groot Marie-Louise, van Grondelle Rienk, Hegemann Peter, Kennis John T M
Biophysics Group, Department of Physics and Astronomy, Faculty of Sciences, Vrije Universiteit, Amsterdam, The Netherlands.
Biophys J. 2008 Nov 15;95(10):4790-802. doi: 10.1529/biophysj.108.139246. Epub 2008 Aug 15.
BLUF domains constitute a recently discovered class of photoreceptor proteins found in bacteria and eukaryotic algae. BLUF domains are blue-light sensitive through a FAD cofactor that is involved in an extensive hydrogen-bond network with nearby amino acid side chains, including a highly conserved tyrosine and glutamine. The participation of particular amino acid side chains in the ultrafast hydrogen-bond switching reaction with FAD that underlies photoactivation of BLUF domains is assessed by means of ultrafast infrared spectroscopy. Blue-light absorption by FAD results in formation of FAD(-) and a bleach of the tyrosine ring vibrational mode on a picosecond timescale, showing that electron transfer from tyrosine to FAD constitutes the primary photochemistry. This interpretation is supported by the absence of a kinetic isotope effect on the fluorescence decay on H/D exchange. Subsequent protonation of FAD(-) to result in FADH() on a picosecond timescale is evidenced by the appearance of a N-H bending mode at the FAD N5 protonation site and of a FADH() C=N stretch marker mode, with tyrosine as the likely proton donor. FADH(*) is reoxidized in 67 ps (180 ps in D(2)O) to result in a long-lived hydrogen-bond switched network around FAD. This hydrogen-bond switch shows infrared signatures from the C-OH stretch of tyrosine and the FAD C4=O and C=N stretches, which indicate increased hydrogen-bond strength at all these sites. The results support a previously hypothesized rotation of glutamine by approximately 180 degrees through a light-driven radical-pair mechanism as the determinant of the hydrogen-bond switch.
蓝光感应结构域构成了一类最近在细菌和真核藻类中发现的光感受器蛋白。蓝光感应结构域通过一个黄素腺嘌呤二核苷酸(FAD)辅因子对蓝光敏感,该辅因子参与了与附近氨基酸侧链的广泛氢键网络,其中包括一个高度保守的酪氨酸和谷氨酰胺。通过超快红外光谱法评估了特定氨基酸侧链在与FAD的超快氢键切换反应中的参与情况,该反应是蓝光感应结构域光激活的基础。FAD对蓝光的吸收导致在皮秒时间尺度上形成FAD(-)并使酪氨酸环振动模式发生漂白,这表明从酪氨酸到FAD的电子转移构成了主要的光化学过程。对H/D交换时荧光衰减不存在动力学同位素效应的观察结果支持了这一解释。随后,在皮秒时间尺度上FAD(-)质子化生成FADH(),这可通过FAD N5质子化位点处N-H弯曲模式以及FADH() C=N伸缩标记模式的出现得到证明,酪氨酸可能作为质子供体。FADH(*)在67皮秒(在D₂O中为180皮秒)内被重新氧化,从而在FAD周围形成一个长寿命的氢键切换网络。这种氢键切换显示出酪氨酸C-OH伸缩振动以及FAD C4=O和C=N伸缩振动的红外特征,这表明所有这些位点的氢键强度都有所增加。这些结果支持了先前假设的通过光驱动自由基对机制使谷氨酰胺旋转约180度作为氢键切换的决定因素。