Ellis Mark J, Buffey Steven G, Hough Michael A, Hasnain S Samar
Molecular Biophysics Group, STFC Daresbury Laboratory, Warrington WA4 4AD, UK.
J Synchrotron Radiat. 2008 Sep;15(Pt 5):433-9. doi: 10.1107/S0909049508014945. Epub 2008 Jul 22.
X-ray-induced redox changes can lead to incorrect assignments of the functional states of metals in metalloprotein crystals. The need for on-line monitoring of the status of metal ions (and other chromophores) during protein crystallography experiments is of growing importance with the use of intense synchrotron X-ray beams. Significant efforts are therefore being made worldwide to combine different spectroscopies in parallel with X-ray crystallographic data collection. Here the implementation and utilization of optical and X-ray absorption spectroscopies on the modern macromolecular crystallography (MX) beamline 10, at the SRS, Daresbury Laboratory, is described. This beamline is equipped with a dedicated monolithic energy-dispersive X-ray fluorescence detector, allowing X-ray absorption spectroscopy (XAS) measurements to be made in situ on the same crystal used to record the diffraction data. In addition, an optical microspectrophotometer has been incorporated on the beamline, thus facilitating combined MX, XAS and optical spectroscopic measurements. By uniting these techniques it is also possible to monitor the status of optically active and optically silent metal centres present in a crystal at the same time. This unique capability has been applied to observe the results of crystallographic data collection on crystals of nitrite reductase from Alcaligenes xylosoxidans, which contains both type-1 and type-2 Cu centres. It is found that the type-1 Cu centre photoreduces quickly, resulting in the loss of the 595 nm peak in the optical spectrum, while the type-2 Cu centre remains in the oxidized state over a much longer time period, for which independent confirmation is provided by XAS data as this centre has an optical spectrum which is barely detectable using microspectrophotometry. This example clearly demonstrates the importance of using two on-line methods, spectroscopy and XAS, for identifying well defined redox states of metalloproteins during crystallographic data collection.
X射线诱导的氧化还原变化可能导致金属蛋白晶体中金属功能状态的错误归属。随着高强度同步加速器X射线束的使用,在蛋白质晶体学实验中对金属离子(以及其他发色团)状态进行在线监测的需求变得越来越重要。因此,全球范围内正在做出重大努力,将不同的光谱学与X射线晶体学数据收集并行结合。本文描述了在达累斯伯里实验室的SRS的现代大分子晶体学(MX)光束线10上光学和X射线吸收光谱学的实施和应用。该光束线配备了专用的单片能量色散X射线荧光探测器,允许在用于记录衍射数据的同一晶体上原位进行X射线吸收光谱(XAS)测量。此外,光束线上还集成了一台光学显微分光光度计,从而便于进行MX、XAS和光学光谱的联合测量。通过将这些技术结合起来,还可以同时监测晶体中存在的光学活性和光学沉默金属中心的状态。这种独特的能力已被应用于观察木糖氧化产碱杆菌亚硝酸还原酶晶体的晶体学数据收集结果,该晶体含有1型和2型铜中心。发现1型铜中心快速光还原,导致光谱中595nm峰消失,而2型铜中心在更长的时间内保持氧化态,XAS数据提供了独立的证实,因为该中心的光谱用显微分光光度法几乎无法检测到。这个例子清楚地证明了在晶体学数据收集过程中使用光谱学和XAS这两种在线方法来识别金属蛋白明确定义的氧化还原状态的重要性。