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松异舟蛾雌性性信息素及其类似衍生物电子性质的理论分析

Theoretical analysis of the electronic properties of the sex pheromone and its analogue derivatives in the female processionary moth Thaumetopoea pytiocampa.

作者信息

Chamorro Ester R, Sequeira Alfredo F, Zalazar M Fernanda, Peruchena Nélida M

机构信息

QUIMOBI, Facultad Regional Resistencia, Universidad Tecnológica Nacional, French 414 Resistencia, Chaco, Argentina.

出版信息

Bioorg Med Chem. 2008 Sep 15;16(18):8535-45. doi: 10.1016/j.bmc.2008.08.008. Epub 2008 Aug 7.

Abstract

In the present work, the distribution of the electronic charge density of the natural sex pheromone, the (Z)-13-hexadecen-11-ynyl acetate, in the female processionary moth, Thaumetopoea pytiocampa, and its nine analogue derivatives was studied within the framework of the Density Functional Theory and the Atoms in Molecules (AIM) Theory at B3LYP/6-31G *//B3LYP/6-31++G * * level. Additionally, molecular electrostatic potential (MEP) maps of the previously mentioned compounds were computed and compared. Furthermore, the substitution of hydrogen atoms from the methyl group in the acetate group by electron withdrawing substituents (i.e., halogen atoms) as well as the replacement effect of hydrogen by electron donor substituents (+I effect) as methyl group, were explored. The key feature of the topological distribution of the charge density in analogue compounds, such as the variations of the topological properties encountered in the region formed by neighbouring atoms from the substitution site were presented and discussed. Using topological parameters, such as electronic charge density, Laplacian, kinetic energy density, and potential energy density evaluated at bond critical points (BCP), we provide here a detailed analysis of the nature of the chemical bonding of these molecules. In addition, the atomic properties (population, charge, energy, volume, and dipole moment) were determined on selected atoms. These properties were analyzed at the substitution site (with respect to the natural sex pheromone) and related to the biological activity and to the possible binding site with the pheromone binding protein, (PBP). Moreover, the Laplacian function of the electronic density was used to locate electrophilic regions susceptible to be attacked (by deficient electron atoms or donor hydrogen). Our results indicate that the change in the atomic properties, such as electronic population and atomic volume, are sensitive indicators of the loss of the biological activity in the analogues studied here. The crucial interaction between the acetate group of the natural sex pheromone and the PBP is most likely to be a hydrogen bonding and the substitution of hydrogen atoms by electronegative atoms in the pheromone molecule reduces the hydrogen acceptor capacity. This situation is mirrored by the diminish of the electronic population on carbon and oxygen atoms at the carbonylic group in the halo-acetate group. Additionally, the modified acetate group (with electronegative atoms) shows new charge concentration critical points or regions of concentration of charge density in which an electrophilic attack can also occur. Finally, the use of the topological analysis based in the charge density distribution and its Laplacian function, in conjunction with MEP maps provides valuable information about the steric volume and electronic requirement of the sex pheromone for binding to the PBP.

摘要

在本研究中,在密度泛函理论和分子中的原子(AIM)理论框架下,于B3LYP/6 - 31G*//B3LYP/6 - 31++G**水平,研究了雌性松异舟蛾(Thaumetopoea pytiocampa)体内天然性信息素(Z)-13 - 十六碳烯 - 11 - 炔基乙酸酯及其九种类似衍生物的电子电荷密度分布。此外,计算并比较了上述化合物的分子静电势(MEP)图。而且,探讨了用吸电子取代基(即卤原子)取代乙酸酯基团中甲基上的氢原子,以及用供电子取代基(如甲基,具有 +I 效应)取代氢原子的取代效应。展示并讨论了类似化合物中电荷密度拓扑分布的关键特征,例如在取代位点由相邻原子形成的区域中遇到的拓扑性质变化。利用在键临界点(BCP)处评估的拓扑参数,如电子电荷密度、拉普拉斯算子、动能密度和势能密度,我们在此对这些分子的化学键性质进行了详细分析。此外,还确定了选定原子的原子性质(布居、电荷、能量、体积和偶极矩)。在取代位点(相对于天然性信息素)对这些性质进行了分析,并将其与生物活性以及与性信息素结合蛋白(PBP)的可能结合位点相关联。此外,电子密度的拉普拉斯函数用于定位易受(缺电子原子或供体氢)攻击的亲电区域。我们的结果表明,原子性质的变化,如电子布居和原子体积,是此处研究的类似物中生物活性丧失的敏感指标。天然性信息素的乙酸酯基团与PBP之间的关键相互作用很可能是氢键,并且性信息素分子中氢原子被电负性原子取代会降低氢受体能力。这种情况反映在卤代乙酸酯基团羰基上碳和氧原子的电子布居减少。此外,修饰后的乙酸酯基团(带有电负性原子)显示出新的电荷浓度临界点或电荷密度集中区域,在这些区域也可能发生亲电攻击。最后,基于电荷密度分布及其拉普拉斯函数的拓扑分析与MEP图结合使用,为性信息素与PBP结合的空间体积和电子需求提供了有价值的信息。

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