Suppr超能文献

止血与血栓形成的数量性状基因座分析

Quantitative trait locus analysis for hemostasis and thrombosis.

作者信息

Sa Qila, Hart Erika, Hill Annie E, Nadeau Joseph H, Hoover-Plow Jane L

机构信息

Department of Molecular Cardiology, Joseph J. Jacobs Center for Thrombosis and Vascular Biology, Cleveland, OH 44195, USA.

出版信息

Mamm Genome. 2008 Jun;19(6):406-12. doi: 10.1007/s00335-008-9122-0. Epub 2008 Sep 12.

Abstract

Susceptibility to thrombosis varies in human populations as well as many in inbred mouse strains. The objective of this study was to characterize the genetic control of thrombotic risk on three chromosomes. Previously, utilizing a tail-bleeding/rebleeding assay as a surrogate of hemostasis and thrombosis function, three mouse chromosome substitution strains (CSS) (B6-Chr5(A/J), Chr11(A/J), Chr17(A/J)) were identified (Hmtb1, Hmtb2, Hmtb3). The tail-bleeding/rebleeding assay is widely used and distinguishes mice with genetic defects in blood clot formation or dissolution. In the present study, quantitative trait locus (QTL) analysis revealed a significant locus for rebleeding (clot stability) time (time between cessation of initial bleeding and start of the second bleeding) on chromosome 5, suggestive loci for bleeding time (time between start of bleeding and cessation of bleeding) also on chromosomes 5, and two suggestive loci for clot stability on chromosome 17 and one on chromosome 11. The three CSS and the parent A/J had elevated clot stability time. There was no interaction of genes on chromosome 11 with genes on chromosome 5 or chromosome 17. On chromosome 17, twenty-three candidate genes were identified in synteny with previously identified loci for thrombotic risk on human chromosome 18. Thus, we have identified new QTLs and candidate genes not previously known to influence thrombotic risk.

摘要

人类群体以及许多近交系小鼠品系对血栓形成的易感性各不相同。本研究的目的是确定三条染色体上血栓形成风险的遗传控制机制。此前,利用尾部出血/再出血试验作为止血和血栓形成功能的替代指标,鉴定出了三个小鼠染色体代换系(CSS)(B6-Chr5(A/J)、Chr11(A/J)、Chr17(A/J))(Hmtb1、Hmtb2、Hmtb3)。尾部出血/再出血试验被广泛应用,可区分在血凝块形成或溶解方面存在遗传缺陷的小鼠。在本研究中,数量性状基因座(QTL)分析显示,5号染色体上存在一个影响再出血(血凝块稳定性)时间(首次出血停止至第二次出血开始之间的时间)的显著基因座,5号染色体上也存在影响出血时间(出血开始至出血停止之间的时间)的提示性基因座,17号染色体上有两个影响血凝块稳定性的提示性基因座,11号染色体上有一个。这三个CSS以及亲本A/J的血凝块稳定性时间均有所延长。11号染色体上的基因与5号或17号染色体上的基因之间不存在相互作用。在17号染色体上,鉴定出了23个与先前在人类18号染色体上确定的血栓形成风险基因座同线的候选基因。因此,我们鉴定出了新的QTL和此前未知的影响血栓形成风险的候选基因。

相似文献

1
Quantitative trait locus analysis for hemostasis and thrombosis.
Mamm Genome. 2008 Jun;19(6):406-12. doi: 10.1007/s00335-008-9122-0. Epub 2008 Sep 12.
3
Mouse chromosome 17 candidate modifier genes for thrombosis.
Mamm Genome. 2010 Aug;21(7-8):337-49. doi: 10.1007/s00335-010-9274-6. Epub 2010 Aug 11.
5
Genetic background determines response to hemostasis and thrombosis.
BMC Blood Disord. 2006 Oct 5;6:6. doi: 10.1186/1471-2326-6-6.
7
Mouse chromosome 7 harbors a quantitative trait locus for isoflurane minimum alveolar concentration.
Anesth Analg. 2007 Aug;105(2):381-5. doi: 10.1213/01.ane.0000261277.65343.4e.
9
A large QTL for fear and anxiety mapped using an F2 cross can be dissected into multiple smaller QTLs.
Genes Brain Behav. 2013 Oct;12(7):714-22. doi: 10.1111/gbb.12064. Epub 2013 Aug 5.

引用本文的文献

1
Contrasting genetic architectures in different mouse reference populations used for studying complex traits.
Genome Res. 2015 Jun;25(6):775-91. doi: 10.1101/gr.187450.114. Epub 2015 May 7.
2
EMILIN2 regulates platelet activation, thrombus formation, and clot retraction.
PLoS One. 2015 Feb 6;10(2):e0115284. doi: 10.1371/journal.pone.0115284. eCollection 2015.
4
Mouse chromosome 17 candidate modifier genes for thrombosis.
Mamm Genome. 2010 Aug;21(7-8):337-49. doi: 10.1007/s00335-010-9274-6. Epub 2010 Aug 11.
5
Wide genetic variation in the native pial collateral circulation is a major determinant of variation in severity of stroke.
J Cereb Blood Flow Metab. 2010 May;30(5):923-34. doi: 10.1038/jcbfm.2010.10. Epub 2010 Feb 3.

本文引用的文献

2
Genetic regulation of plasma von Willebrand factor levels: quantitative trait loci analysis in a mouse model.
J Thromb Haemost. 2007 Feb;5(2):329-35. doi: 10.1111/j.1538-7836.2007.02325.x. Epub 2006 Nov 28.
3
Genetic background determines response to hemostasis and thrombosis.
BMC Blood Disord. 2006 Oct 5;6:6. doi: 10.1186/1471-2326-6-6.
4
Mind the gap: analysis of marker-assisted breeding strategies for inbred mouse strains.
Mamm Genome. 2006 Apr;17(4):273-87. doi: 10.1007/s00335-005-0123-y. Epub 2006 Apr 4.
5
Atherosclerosis susceptibility loci identified from a strain intercross of apolipoprotein E-deficient mice via a high-density genome scan.
Arterioscler Thromb Vasc Biol. 2006 Mar;26(3):597-603. doi: 10.1161/01.ATV.0000201044.33220.5c. Epub 2005 Dec 22.
6
Tissue-specific hemostasis in mice.
Arterioscler Thromb Vasc Biol. 2005 Nov;25(11):2273-81. doi: 10.1161/01.ATV.0000183884.06371.52. Epub 2005 Aug 25.
7
Familial multiple coagulation factor deficiencies: new biologic insight from rare genetic bleeding disorders.
J Thromb Haemost. 2004 Sep;2(9):1564-72. doi: 10.1111/j.1538-7836.2004.00857.x.
9
Genetic deletion of mouse platelet glycoprotein Ibbeta produces a Bernard-Soulier phenotype with increased alpha-granule size.
Blood. 2004 Oct 15;104(8):2339-44. doi: 10.1182/blood-2004-03-1127. Epub 2004 Jun 22.
10
Fine mapping of a murine growth locus to a 1.4-cM region and resolution of linked QTL.
Mamm Genome. 2004 Jun;15(6):482-91. doi: 10.1007/s00335-004-3046-0.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验