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溴诱导的猪皮肤烧伤的基因表达分析。

Gene expression analysis of bromine-induced burns in porcine skin.

作者信息

Price Jennifer A, Rogers James V, McDougal James N, Shaw Morgan Q, Reid Frances M, Kiser Robyn C, Graham John S

机构信息

Battelle Memorial Institute, Biomedical Research Center, Columbus, OH 43201, United States.

出版信息

Toxicol Lett. 2008 Nov 10;182(1-3):69-78. doi: 10.1016/j.toxlet.2008.08.007. Epub 2008 Aug 27.

Abstract

Bromine is an industrial chemical that is irritating to the skin and causes cutaneous burns. An important factor in selecting or developing an effective treatment is to understand the underlying molecular mechanisms of tissue damage and wound healing. This study used a weanling swine burn model and microarray analysis to evaluate the effect of exposure length and sampling times on the transcriptional changes in response to cutaneous bromine injury. Ventral abdominal sites (N=4/treatment group) were exposed to 600microL undiluted bromine for 45 s or 8 min. At 24 h and 7d post-exposure, total RNA from skin samples was isolated, processed, and hybridized to Affymetrix GeneChip Porcine Genome Arrays. Expression analysis revealed that bromine exposure duration appeared to have less effect on the transcript changes than the sampling time. The percent transcripts changed at 24h were similar (30%) whether having a 45 s or 8 min bromine exposure; percent transcripts changed at 7d were also similar (62%) regardless of exposure length. However, only 13-14% of the transcripts were similar when comparing samples analyzed at 24h and 7d. Ingenuity Pathways Analysis (IPA) revealed six common biological functions among the top 10 functions of each experimental group, while canonical pathway analysis revealed 11 genes that were commonly shared among 24 significantly altered signaling pathways. Additionally, there were 11 signaling pathways in which there were no commonly shared transcripts. The present study is an initial assessment of the transcriptional responses to cutaneous bromine exposure identifying molecular networks and genes that could serve as targets for developing therapeutics for bromine-induced skin injury.

摘要

溴是一种工业化学品,对皮肤有刺激性,可导致皮肤烧伤。选择或开发有效治疗方法的一个重要因素是了解组织损伤和伤口愈合的潜在分子机制。本研究使用断奶仔猪烧伤模型和微阵列分析来评估暴露时间和采样时间对皮肤溴损伤反应中转录变化的影响。将腹部腹侧部位(每组N = 4)暴露于600μL未稀释的溴中45秒或8分钟。在暴露后24小时和7天,分离、处理皮肤样本的总RNA,并与Affymetrix GeneChip猪基因组阵列杂交。表达分析显示,与采样时间相比,溴暴露持续时间对转录本变化的影响似乎较小。无论溴暴露45秒还是8分钟,24小时时转录本变化的百分比相似(30%);无论暴露时间长短,7天时转录本变化的百分比也相似(62%)。然而,比较24小时和7天分析的样本时,只有13 - 14%的转录本相似。 Ingenuity Pathways Analysis(IPA)显示每个实验组前10大功能中有6个常见生物学功能,而经典通路分析显示在24条显著改变的信号通路中有11个基因是共同的。此外,有11条信号通路没有共同的转录本。本研究是对皮肤溴暴露转录反应的初步评估,确定了可作为开发溴诱导皮肤损伤治疗靶点的分子网络和基因。

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