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爬山虎肉桂酸4-羟化酶编码基因的分离与鉴定

Isolation and characterization of a gene encoding cinnamate 4-hydroxylase from Parthenocissus henryana.

作者信息

Liu Shujun, Hu Yuanlei, Wang Xiaoli, Han Li, Song Songquan, Cheng Hongyan, Lin Zhongping

机构信息

College of Life Sciences, National Key Laboratory of Protein Engineering and Plant Genetic Engineering, Peking University, Beijing, 100871, China.

出版信息

Mol Biol Rep. 2009 Jul;36(6):1605-10. doi: 10.1007/s11033-008-9357-6. Epub 2008 Sep 13.

Abstract

Cinnamate 4-hydroxylase (C4H, EC 1.14.13.11) plays an important role in the phenylpropanoid pathway, which produces many economically important secondary metabolites. A gene coding for C4H, designated as PhC4H (GenBank accession no. DQ211885) was isolated from Parthenocissus henryana. The full-length PhC4H cDNA is 1,747 bp long with a 1,518-bp open reading frame encoding a protein of 505 amino acids, a 40-bp 5' non-coding region and a 189-bp 3'-untranslated region. Secondary structure of the deduced PhC4H protein consists of 41.78% alpha helix, 15.64% extended strand and 42.57% random coil. The genomic DNA of PhC4H is 2,895 bp long and contains two introns; intron I is 205-bp and intron II is 1,172-bp (GenBank accession no. EU440734). DNA gel blot analysis revealed that there might be a single copy of PhC4H in Parthenocissus henryana genome. By using anchored PCR, a 963-bp promoter sequence was isolated and it contains many responsive elements conserved in the upstream region of PAL, C4H and 4CL including the P-, A-, L- and H-boxes.

摘要

肉桂酸4-羟化酶(C4H,EC 1.14.13.11)在苯丙烷类途径中起着重要作用,该途径产生许多具有重要经济价值的次生代谢产物。从三叶地锦中分离出一个编码C4H的基因,命名为PhC4H(GenBank登录号:DQ211885)。PhC4H cDNA全长1747 bp,开放阅读框为1518 bp,编码一个由505个氨基酸组成的蛋白质,5'非编码区为40 bp,3'非翻译区为189 bp。推导的PhC4H蛋白的二级结构由41.78%的α螺旋、15.64%的延伸链和42.57%的无规卷曲组成。PhC4H的基因组DNA长2895 bp,包含两个内含子;内含子I为205 bp,内含子II为1172 bp(GenBank登录号:EU440734)。DNA凝胶印迹分析表明,三叶地锦基因组中可能只有一个PhC4H拷贝。通过锚定PCR分离出一个963 bp的启动子序列,它包含许多在PAL、C4H和4CL上游区域保守的响应元件,包括P-、A-、L-和H-框。

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