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超咸缺氧的阿塔兰特深海盆地中的真核微生物。

Microbial eukaryotes in the hypersaline anoxic L'Atalante deep-sea basin.

作者信息

Alexander Eva, Stock Alexandra, Breiner Hans-Werner, Behnke Anke, Bunge John, Yakimov Michail M, Stoeck Thorsten

机构信息

University of Kaiserslautern, School of Biology, Kaiserslautern, Germany.

出版信息

Environ Microbiol. 2009 Feb;11(2):360-81. doi: 10.1111/j.1462-2920.2008.01777.x. Epub 2008 Sep 26.

Abstract

The frontiers of eukaryote life in nature are still unidentified. In this study, we analysed protistan communities in the hypersaline (up to 365 g l(-1) NaCl) anoxic L'Atalante deep-sea basin located in the eastern Mediterranean Sea. Targeting 18S ribosomal RNA retrieved from the basin's lower halocline (3501 m depth) we detected 279 protistan sequences that grouped into 42 unique phylotypes (99% sequence similarity). Statistical analyses revealed that these phylotypes account only for a proportion of the protists inhabiting this harsh environment with as much as 50% missed by this survey. Most phylotypes were affiliated with ciliates (45%), dinoflagellates (21%), choanoflagelates (10%) and uncultured marine alveolates (6%). Sequences from other taxonomic groups like stramenopiles, Polycystinea, Acantharea and Euglenozoa, all of which are typically found in non-hypersaline deep-sea systems, are either missing or very rare in our cDNA clone library. Although many DHAB sequences fell within previously identified environmental clades, a large number branched relatively deeply. Phylotype richness, community membership and community structure differ significantly from a deep seawater reference community (3499 m depth). Also, the protistan community in the L'Atalante basin is distinctively different from any previously described hypersaline community. In conclusion, we hypothesize that extreme environments may exert a high selection pressure possibly resulting in the evolution of an exceptional and distinctive assemblage of protists. The deep hypersaline anoxic basins in the Mediterranean Sea provide an ideal platform to test for this hypothesis and are promising targets for the discovery of undescribed protists with unknown physiological capabilities.

摘要

自然界中真核生物生命的前沿仍未明确。在本研究中,我们分析了位于地中海东部的超盐度(高达365 g l⁻¹ NaCl)缺氧的拉塔兰特深海盆地中的原生生物群落。针对从该盆地较低盐跃层(深度3501米)获取的18S核糖体RNA,我们检测到279个原生生物序列,这些序列可归为42个独特的系统发育型(序列相似度99%)。统计分析表明,这些系统发育型仅占栖息于这种恶劣环境中的原生生物的一部分,本调查遗漏了多达50%的原生生物。大多数系统发育型与纤毛虫(45%)、甲藻(21%)、领鞭毛虫(10%)和未培养的海洋肺泡虫(6%)有关。来自其他分类类群的序列,如硅藻、多囊虫、棘胞虫和眼虫,这些通常在非超盐度深海系统中发现的类群,在我们的cDNA克隆文库中要么缺失,要么非常罕见。尽管许多极端嗜盐缺氧盆地(DHAB)序列属于先前确定的环境分支,但大量序列分支相对较深。系统发育型丰富度、群落成员和群落结构与深海海水参考群落(深度3499米)有显著差异。此外,拉塔兰特盆地的原生生物群落与任何先前描述的超盐度群落明显不同。总之,我们假设极端环境可能施加了很高的选择压力,可能导致原生生物形成特殊且独特的组合。地中海的深层超盐度缺氧盆地为检验这一假设提供了理想平台,并且是发现具有未知生理能力的未描述原生生物的有希望的目标。

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