Kintses Bálint, Yang Zhenhui, Málnási-Csizmadia András
Department of Biochemistry, Eötvös Loránd University, Budapest H-1117, Hungary.
J Biol Chem. 2008 Dec 5;283(49):34121-8. doi: 10.1074/jbc.M805848200. Epub 2008 Oct 14.
A seesaw-like movement of the relay region upon the recovery step of myosin was recently simulated in silico. In this model the relay helix tilts around its pivoting point formed by a phenylalanine cluster (Phe(481), Phe(482), and Phe(652)), which moves the lever arm of myosin. To study the effect of the elimination of the proposed pivoting point, these phenylalanines were mutated to alanines in two Dictyostelium myosin II motor domain constructs (M(F481A, F482A) and M(F652A)). The relay movement was followed by the fluorescence change of Trp(501) located in the relay region. The steady-state and transient kinetic fluorescence experiments showed that the lack of the phenylalanine fulcrum perturbs the formation of the "up" lever arm state, and only moderate effects were found in the nucleotide binding, the formation of the "down" lever arm position, and the ATP hydrolysis steps. We conclude that the lack of the fulcrum decouples the distal part of the relay from the nucleotide binding site upon the recovery step. Our molecular dynamics simulations also showed that the conformation of the motor is not perturbed by the mutation in the down lever arm state, however, the lack of the pivoting point rearranges the dynamic pattern of the kink region of the relay helix.
最近在计算机上模拟了肌球蛋白恢复步骤中中继区域类似跷跷板的运动。在该模型中,中继螺旋围绕由苯丙氨酸簇(Phe(481)、Phe(482)和Phe(652))形成的枢轴点倾斜,这会移动肌球蛋白的杠杆臂。为了研究消除提议的枢轴点的影响,在两种盘基网柄菌肌球蛋白II运动结构域构建体(M(F481A, F482A)和M(F652A))中将这些苯丙氨酸突变为丙氨酸。通过位于中继区域的Trp(501)的荧光变化跟踪中继运动。稳态和瞬态动力学荧光实验表明,缺乏苯丙氨酸支点会干扰“上”杠杆臂状态的形成,而在核苷酸结合、“下”杠杆臂位置的形成和ATP水解步骤中仅发现中等程度的影响。我们得出结论,在恢复步骤中,缺乏支点会使中继的远端与核苷酸结合位点解耦。我们的分子动力学模拟还表明,在“下”杠杆臂状态下,运动结构域的构象不会受到突变的干扰,然而,缺乏枢轴点会重新排列中继螺旋扭结区域的动态模式。