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对结合有blebbistatin的肌球蛋白•ADP复合物的结构和计算见解,该复合物具有沿两步肌球蛋白动力冲程的ADP释放构象特征。

Structural and Computational Insights into a Blebbistatin-Bound Myosin•ADP Complex with Characteristics of an ADP-Release Conformation along the Two-Step Myosin Power Stoke.

作者信息

Ewert Wiebke, Franz Peter, Tsiavaliaris Georgios, Preller Matthias

机构信息

Institute for Biophysical Chemistry, Structural Bioinformatics and Chemical Biology, Hannover Medical School, 30625 Hannover, Germany.

Institute for Biophysical Chemistry, Cellular Biophysics, Hannover Medical School, 30625 Hannover, Germany.

出版信息

Int J Mol Sci. 2020 Oct 8;21(19):7417. doi: 10.3390/ijms21197417.

DOI:10.3390/ijms21197417
PMID:33049993
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7582316/
Abstract

The motor protein myosin drives a wide range of cellular and muscular functions by generating directed movement and force, fueled through adenosine triphosphate (ATP) hydrolysis. Release of the hydrolysis product adenosine diphosphate (ADP) is a fundamental and regulatory process during force production. However, details about the molecular mechanism accompanying ADP release are scarce due to the lack of representative structures. Here we solved a novel blebbistatin-bound myosin conformation with critical structural elements in positions between the myosin pre-power stroke and rigor states. ADP in this structure is repositioned towards the surface by the phosphate-sensing P-loop, and stabilized in a partially unbound conformation via a salt-bridge between Arg131 and Glu187. A 5 Å rotation separates the mechanical converter in this conformation from the rigor position. The crystallized myosin structure thus resembles a conformation towards the end of the two-step power stroke, associated with ADP release. Computationally reconstructing ADP release from myosin by means of molecular dynamics simulations further supported the existence of an equivalent conformation along the power stroke that shows the same major characteristics in the myosin motor domain as the resolved blebbistatin-bound myosin-II·ADP crystal structure, and identified a communication hub centered on Arg232 that mediates chemomechanical energy transduction.

摘要

马达蛋白肌球蛋白通过产生定向运动和力来驱动广泛的细胞和肌肉功能,其能量由三磷酸腺苷(ATP)水解提供。水解产物二磷酸腺苷(ADP)的释放是力产生过程中的一个基本调节过程。然而,由于缺乏代表性结构,关于伴随ADP释放的分子机制的细节尚不清楚。在此,我们解析了一种与肌球蛋白结合的新型博来霉素结构,其中关键结构元件处于肌球蛋白预动力冲程和僵直状态之间的位置。在这种结构中,ADP通过磷酸感应P环重新定位到表面,并通过Arg131和Glu187之间的盐桥稳定在部分未结合的构象中。5埃的旋转将这种构象中的机械转换器与僵直位置分开。因此,结晶的肌球蛋白结构类似于两步动力冲程末期与ADP释放相关的构象。通过分子动力学模拟从肌球蛋白中计算重建ADP释放,进一步支持了沿着动力冲程存在等效构象的观点,该构象在肌球蛋白运动结构域中显示出与解析的博来霉素结合的肌球蛋白-II·ADP晶体结构相同的主要特征,并确定了一个以Arg232为中心的通信枢纽,该枢纽介导化学机械能转导。

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