Suppr超能文献

通过随机文库筛选鉴定细胞色素P450 2A6中参与4-氯吲哚3-羟基化的氨基酸残基。

Identification of amino acid residues involved in 4-chloroindole 3-hydroxylation by cytochrome P450 2A6 using screening of random libraries.

作者信息

Zhang Zhi-Gang, Liu Yan, Guengerich F Peter, Matse Johannes H, Chen Jun, Wu Zhong-Liu

机构信息

Chengdu Institute of Biology, Chinese Academy of Sciences, P.O. Box 416, Chengdu 610041, China.

出版信息

J Biotechnol. 2009 Jan 1;139(1):12-8. doi: 10.1016/j.jbiotec.2008.09.010. Epub 2008 Oct 15.

Abstract

Cytochrome P450 (P450) 2A6 is able to catalyze indole hydroxylation to form the blue dye indigo. The wild-type P450 2A6 enzyme was randomly mutated throughout the whole open reading frame and screened using 4-chloroindole hydroxylation, a substituted indole selected from 30 indole compounds for enhanced color development. Mutants with up to 5-fold increases of catalytic efficiency (k(cat)/K(m)) and 2-fold increases in k(cat) were selected after two rounds of screening. Important residues located both in (e.g., Thr305) and outside the active site (e.g., Ser224) were identified. The study utilized a better substrate for "indigo assay" to obtain new information on the structure-functional relationship of P450 2A6 that was not revealed by previous mutagenesis studies with this enzyme.

摘要

细胞色素P450(P450)2A6能够催化吲哚羟基化反应形成蓝色染料靛蓝。野生型P450 2A6酶在整个开放阅读框中进行随机突变,并使用4-氯吲哚羟基化反应进行筛选,4-氯吲哚是从30种吲哚化合物中选出的一种用于增强显色的取代吲哚。经过两轮筛选,选出了催化效率(k(cat)/K(m))提高了5倍、k(cat)提高了2倍的突变体。确定了位于活性位点内部(如Thr305)和外部(如Ser224)的重要残基。该研究使用了一种更适合“靛蓝检测”的底物,以获取关于P450 2A6结构-功能关系的新信息,而此前对该酶的诱变研究并未揭示这些信息。

相似文献

2
Analysis of coumarin 7-hydroxylation activity of cytochrome P450 2A6 using random mutagenesis.
J Biol Chem. 2005 Dec 2;280(48):40319-27. doi: 10.1074/jbc.M508171200. Epub 2005 Oct 5.
3
Random mutagenesis of human cytochrome p450 2A6 and screening with indole oxidation products.
Arch Biochem Biophys. 2001 Nov 1;395(1):25-31. doi: 10.1006/abbi.2001.2569.
4
Expansion of substrate specificity of cytochrome P450 2A6 by random and site-directed mutagenesis.
J Biol Chem. 2005 Dec 9;280(49):41090-100. doi: 10.1074/jbc.M508182200. Epub 2005 Oct 7.
5
Directed-evolution analysis of human cytochrome P450 2A6 for enhanced enzymatic catalysis.
J Toxicol Environ Health A. 2014;77(22-24):1409-18. doi: 10.1080/15287394.2014.951757.
7
Metabolism of 7-ethoxycoumarin, safrole, flavanone and hydroxyflavanone by cytochrome P450 2A6 variants.
Biopharm Drug Dispos. 2013 Mar;34(2):87-97. doi: 10.1002/bdd.1825. Epub 2012 Dec 4.
8
Structural insight into the altered substrate specificity of human cytochrome P450 2A6 mutants.
Arch Biochem Biophys. 2007 Aug 15;464(2):197-206. doi: 10.1016/j.abb.2007.04.028. Epub 2007 May 11.
9
Oxidation of indole by cytochrome P450 enzymes.
Biochemistry. 2000 Nov 14;39(45):13817-24. doi: 10.1021/bi001229u.
10
Substrate Selectivities and Catalytic Activities of Marmoset Liver Cytochrome P450 2A6 Differed from Those of Human P450 2A6.
Drug Metab Dispos. 2015 Jul;43(7):969-76. doi: 10.1124/dmd.115.063909. Epub 2015 Apr 9.

引用本文的文献

1
Exploiting photosynthesis-driven P450 activity to produce indican in tobacco chloroplasts.
Front Plant Sci. 2023 Jan 9;13:1049177. doi: 10.3389/fpls.2022.1049177. eCollection 2022.
3
Detoxification of Indole by an Indole-Induced Flavoprotein Oxygenase from Acinetobacter baumannii.
PLoS One. 2015 Sep 21;10(9):e0138798. doi: 10.1371/journal.pone.0138798. eCollection 2015.
5
Human cytochrome P450 17A1 conformational selection: modulation by ligand and cytochrome b5.
J Biol Chem. 2014 May 16;289(20):14310-20. doi: 10.1074/jbc.M114.560144. Epub 2014 Mar 26.
8
Engineering cytochrome P450 biocatalysts for biotechnology, medicine and bioremediation.
Expert Opin Drug Metab Toxicol. 2010 Feb;6(2):115-31. doi: 10.1517/17425250903431040.

本文引用的文献

1
Discovery of a novel styrene monooxygenase originating from the metagenome.
Appl Environ Microbiol. 2007 Sep;73(18):5832-9. doi: 10.1128/AEM.02708-06. Epub 2007 Jul 20.
2
Structural insight into the altered substrate specificity of human cytochrome P450 2A6 mutants.
Arch Biochem Biophys. 2007 Aug 15;464(2):197-206. doi: 10.1016/j.abb.2007.04.028. Epub 2007 May 11.
3
Extending the diversity of cytochrome P450 enzymes by DNA family shuffling.
Gene. 2007 Jun 15;395(1-2):40-8. doi: 10.1016/j.gene.2007.01.031. Epub 2007 Feb 20.
4
Directed evolution of oxygenases: screening systems, success stories and challenges.
Comb Chem High Throughput Screen. 2007 Mar;10(3):197-217. doi: 10.2174/138620707780126723.
5
Biosynthesis of new indigoid inhibitors of protein kinases using recombinant cytochrome P450 2A6.
Chem Biodivers. 2005 Jan;2(1):51-65. doi: 10.1002/cbdv.200490166.
6
Characterization of a forest soil metagenome clone that confers indirubin and indigo production on Escherichia coli.
Appl Environ Microbiol. 2005 Dec;71(12):7768-77. doi: 10.1128/AEM.71.12.7768-7777.2005.
7
Expansion of substrate specificity of cytochrome P450 2A6 by random and site-directed mutagenesis.
J Biol Chem. 2005 Dec 9;280(49):41090-100. doi: 10.1074/jbc.M508182200. Epub 2005 Oct 7.
8
Analysis of coumarin 7-hydroxylation activity of cytochrome P450 2A6 using random mutagenesis.
J Biol Chem. 2005 Dec 2;280(48):40319-27. doi: 10.1074/jbc.M508171200. Epub 2005 Oct 5.
9
Structures of human microsomal cytochrome P450 2A6 complexed with coumarin and methoxsalen.
Nat Struct Mol Biol. 2005 Sep;12(9):822-3. doi: 10.1038/nsmb971. Epub 2005 Aug 7.
10
Identification of broad specificity P450CAM variants by primary screening against indole as substrate.
Chem Commun (Camb). 2005 Aug 7(29):3652-4. doi: 10.1039/b506156c. Epub 2005 Jul 5.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验