Yan Zier, Wang Huanchen, Cai Jiwen, Ke Hengming
Laboratory of Structure Biology, School of Pharmaceutical Sciences, Sun Yat-sen University, Guangzhou 510275, PR China.
Protein Expr Purif. 2009 Mar;64(1):82-8. doi: 10.1016/j.pep.2008.10.005. Epub 2008 Oct 19.
Cyclic nucleotide phosphodiesterase-8 (PDE8) hydrolyzes the second messenger cAMP and is involved in many biological processes such as testosterone production. Although the bacterial and mammalian expression systems have been extensively tried, production of large quantity of soluble and active PDE8 remains to be a major hurdle for pharmacological and structural studies. Reported here is a detailed protocol of refolding and purification of large quantity of the PDE8A1 catalytic domain (residues 480-820) and kinetic characterization of the refolded protein. This protocol yielded about 8 mg of the PDE8A catalytic domain from 2l Escherichia coli culture, which has at least 40-fold higher activity than those reported in literature. The PDE8A1 catalytic domain has k(cat) of 4.0 s(-1) for Mn(2+) and 2.9s(-1) for Mg(2+), and the K(M) values of 1-1.8 microM. In addition, the PDE8A1 (205-820) fragment that contains both PAS and catalytic domains was expressed in E. coli and refolded. This PDE8A1 (205-820) fragment has k(cat) of 1.1 s(-1) and K(M) of 0.28 microM, but aggregated at high concentration. The K(M) of PDE8A1 (205-820) is 2- to 7-fold higher than the K(M) values of 40-150 nM for the full-length PDE8s in literature, but about 6-fold lower than that of the catalytic domain. Thus, the K(M) difference likely implies an allosteric regulation of the PDE8A activity by its PAS domain.
环核苷酸磷酸二酯酶8(PDE8)可水解第二信使环磷酸腺苷(cAMP),并参与许多生物学过程,如睾酮生成。尽管已经广泛尝试了细菌和哺乳动物表达系统,但大量生产可溶性和活性PDE8仍然是药理学和结构研究的主要障碍。本文报道了大量PDE8A1催化结构域(480 - 820位氨基酸残基)的重折叠和纯化详细方案以及重折叠蛋白的动力学表征。该方案从2升大肠杆菌培养物中获得了约8毫克的PDE8催化结构域,其活性比文献报道的至少高40倍。PDE8A1催化结构域对Mn(2+)的催化常数k(cat)为4.0 s(-1),对Mg(2+)的为2.9 s(-1),米氏常数K(M)值为1 - 1.8微摩尔。此外,包含PAS和催化结构域的PDE8A1(205 - 820)片段在大肠杆菌中表达并重折叠。该PDE8A1(205 - 820)片段的k(cat)为1.1 s(-1),K(M)为0.28微摩尔,但在高浓度下会聚集。PDE8A1(205 - 820)的K(M)比文献中报道的全长PDE8的40 - 150纳摩尔的K(M)值高2至7倍,但比催化结构域的K(M)低约6倍。因此,K(M)的差异可能意味着PDE8A活性受其PAS结构域的变构调节。