Hu Bin, Tomita Masaru
Institute for Advanced Biosciences, Keio University, Tsuruoka, 997-0035, Japan,
Syst Synth Biol. 2007 Mar;1(1):47-58. doi: 10.1007/s11693-006-9004-2. Epub 2007 Jan 26.
Hsp70 chaperones assist protein folding by cycling between the ATP-bound T state with low affinity for substrates and the ADP-bound R state with high affinity for substrates. The transition from the T to R state is catalyzed by the synergistic action of the substrate and DnaJ cochaperones. The reverse transition from the R state to the T state is accelerated by the nucleotide exchange factor GrpE. These two processes, T-to-R and R-to-T conversion, are affected differently by temperature change. Here we modeled Hsp70-mediated protein folding under permanent and transient heat shock based on published experimental data. Our simulation results were in agreement with in vitro wild-type Escherichia coli chaperone experimental data at 25 degrees C and reflected R-to-T ratio dynamics in response to temperature effects. Our simulation results suggested that the chaperone system evolved naturally to maintain the concentration of active protein as high as possible during heat shock, even at the cost of recovered activity after return to optimal growth conditions. They also revealed that the chaperone system evolved to suppress ATP consumption at non-optimal high growing temperatures.
热休克蛋白70(Hsp70)伴侣蛋白通过在对底物亲和力低的ATP结合T态和对底物亲和力高的ADP结合R态之间循环来协助蛋白质折叠。从T态到R态的转变由底物和DnaJ共伴侣蛋白的协同作用催化。从R态到T态的反向转变由核苷酸交换因子GrpE加速。这两个过程,即T到R和R到T的转换,受温度变化的影响不同。在这里,我们根据已发表的实验数据,对在持续和短暂热休克下Hsp70介导的蛋白质折叠进行了建模。我们的模拟结果与25摄氏度下体外野生型大肠杆菌伴侣蛋白的实验数据一致,并反映了响应温度效应的R到T比率动态。我们的模拟结果表明,伴侣蛋白系统自然进化,以便在热休克期间尽可能保持活性蛋白的浓度,即使以回到最佳生长条件后恢复的活性为代价。它们还表明,伴侣蛋白系统进化以抑制在非最佳高生长温度下的ATP消耗。