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鼠伤寒沙门氏菌三型分泌系统hilA启动子调控的建模

Modelling of the regulation of the hilA promoter of type three secretion system of Salmonella enterica serovar Typhimurium.

作者信息

Maithreye Rengaswamy, Mande Sharmila S

机构信息

Bio-Sciences Division, Advanced Technology Centre, Tata Consultancy Services, Hyderabad, 500 081, Andhra Pradesh, India.

出版信息

Syst Synth Biol. 2007 Aug;1(3):129-37. doi: 10.1007/s11693-007-9009-5. Epub 2007 Dec 5.

Abstract

One of the most common modes of secretion of toxins in gram-negative bacteria is via the type three secretion system (TTSS), which enables the toxins to be specifically exported into the host cell. The hilA gene product is a key regulator of the expression of the TTSS located on the pathogenicity island (SPI-1) of Salmonella enterica serovar Typhimurium. It has been proposed earlier that the regulation of HilA expression is via a complex feedforward loop involving the transactivators HilD, HilC and RtsA. In this paper, we have constructed a mathematical model of regulation of hilA-promoter by all the three activators using two feedforward loops. We have modified the model to include additional complexities in regulation such as the proposed positive feedback and cross regulations of the three transactivators. Results of the various models indicate that the basic model involving two Type I coherent feedforward loops with an OR gate is sufficient to explain the published experimental observations. We also discuss two scenarios where the regulation can occur via monomers or heterodimers of the transactivators and propose experiments that can be performed to distinguish the two modes of regulator function.

摘要

革兰氏阴性菌中最常见的毒素分泌方式之一是通过三型分泌系统(TTSS),该系统能使毒素特异性地输出到宿主细胞中。hilA基因产物是位于鼠伤寒沙门氏菌致病岛(SPI-1)上的TTSS表达的关键调节因子。此前有人提出,HilA表达的调控是通过一个复杂的前馈环实现的,该前馈环涉及反式激活因子HilD、HilC和RtsA。在本文中,我们构建了一个数学模型,利用两个前馈环来描述这三种激活因子对hilA启动子的调控。我们对模型进行了修改,以纳入调控中的其他复杂性因素,如三种反式激活因子之间的正反馈和交叉调控。各种模型的结果表明,包含两个带有或门的I型相干前馈环的基本模型足以解释已发表实验观察结果。我们还讨论了两种情况,即调控可通过反式激活因子的单体或异二聚体发生,并提出了可用于区分这两种调节因子功能模式的实验。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ff88/2398718/a48452279151/11693_2007_9009_Fig1_HTML.jpg

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