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Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer.

作者信息

Houlston Richard S, Webb Emily, Broderick Peter, Pittman Alan M, Di Bernardo Maria Chiara, Lubbe Steven, Chandler Ian, Vijayakrishnan Jayaram, Sullivan Kate, Penegar Steven, Carvajal-Carmona Luis, Howarth Kimberley, Jaeger Emma, Spain Sarah L, Walther Axel, Barclay Ella, Martin Lynn, Gorman Maggie, Domingo Enric, Teixeira Ana S, Kerr David, Cazier Jean-Baptiste, Niittymäki Iina, Tuupanen Sari, Karhu Auli, Aaltonen Lauri A, Tomlinson Ian P M, Farrington Susan M, Tenesa Albert, Prendergast James G D, Barnetson Rebecca A, Cetnarskyj Roseanne, Porteous Mary E, Pharoah Paul D P, Koessler Thibaud, Hampe Jochen, Buch Stephan, Schafmayer Clemens, Tepel Jurgen, Schreiber Stefan, Völzke Henry, Chang-Claude Jenny, Hoffmeister Michael, Brenner Hermann, Zanke Brent W, Montpetit Alexandre, Hudson Thomas J, Gallinger Steven, Campbell Harry, Dunlop Malcolm G

机构信息

Section of Cancer Genetics, Institute of Cancer Research, Sutton, UK.

出版信息

Nat Genet. 2008 Dec;40(12):1426-35. doi: 10.1038/ng.262. Epub 2008 Nov 16.


DOI:10.1038/ng.262
PMID:19011631
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC2836775/
Abstract

Genome-wide association (GWA) studies have identified multiple loci at which common variants modestly influence the risk of developing colorectal cancer (CRC). To enhance power to identify additional loci with similar effect sizes, we conducted a meta-analysis of two GWA studies, comprising 13,315 individuals genotyped for 38,710 common tagging SNPs. We undertook replication testing in up to eight independent case-control series comprising 27,418 subjects. We identified four previously unreported CRC risk loci at 14q22.2 (rs4444235, BMP4; P = 8.1 x 10(-10)), 16q22.1 (rs9929218, CDH1; P = 1.2 x 10(-8)), 19q13.1 (rs10411210, RHPN2; P = 4.6 x 10(-9)) and 20p12.3 (rs961253; P = 2.0 x 10(-10)). These findings underscore the value of large sample series for discovery and follow-up of genetic variants contributing to the etiology of CRC.

摘要

相似文献

[1]
Meta-analysis of genome-wide association data identifies four new susceptibility loci for colorectal cancer.

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[2]
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[3]
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[4]
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[6]
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[7]
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[8]
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[9]
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[10]
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本文引用的文献

[1]
A genome-wide association study identifies six susceptibility loci for chronic lymphocytic leukemia.

Nat Genet. 2008-10

[2]
Identification of low penetrance alleles for lung cancer: the GEnetic Lung CAncer Predisposition Study (GELCAPS).

BMC Cancer. 2008-8-20

[3]
Multiple loci with different cancer specificities within the 8q24 gene desert.

J Natl Cancer Inst. 2008-7-2

[4]
A genome-wide association study identifies colorectal cancer susceptibility loci on chromosomes 10p14 and 8q23.3.

Nat Genet. 2008-5

[5]
Genome-wide association scan identifies a colorectal cancer susceptibility locus on 11q23 and replicates risk loci at 8q24 and 18q21.

Nat Genet. 2008-5

[6]
Common genetic variants at the CRAC1 (HMPS) locus on chromosome 15q13.3 influence colorectal cancer risk.

Nat Genet. 2008-1

[7]
A genome-wide association study shows that common alleles of SMAD7 influence colorectal cancer risk.

Nat Genet. 2007-11

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National study of colorectal cancer genetics.

Br J Cancer. 2007-11-5

[9]
A genome-wide association scan of tag SNPs identifies a susceptibility variant for colorectal cancer at 8q24.21.

Nat Genet. 2007-8

[10]
Genome-wide association scan identifies a colorectal cancer susceptibility locus on chromosome 8q24.

Nat Genet. 2007-8

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