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具有核心残基尿素侧链的异源三聚体卷曲螺旋。

Heterotrimeric coiled coils with core residue urea side chains.

作者信息

Diss Maria L, Kennan Alan J

机构信息

Department of Chemistry, Colorado State University, Fort Collins, Colorado 80523, USA.

出版信息

J Org Chem. 2008 Dec 19;73(24):9752-5. doi: 10.1021/jo802379p.

Abstract

We report several coiled coil heterotrimers with varying core residue buried polar groups, all with T(m) values >43 degrees C. Introduction of new synthetic side chain structures, including some terminating in monosubstituted ureas, diversifies the pool of viable core residue candidates. A study of core charge pairings demonstrates that, unlike dimeric systems, trimeric coiled coils do not tolerate guanidine-guanidine contacts, even in the presence of a compensating carboxylate. Overall, the roster of feasible coiled coil designs is significantly expanded.

摘要

我们报道了几种具有不同核心残基掩埋极性基团的卷曲螺旋异源三聚体,其所有T(m)值均>43摄氏度。新合成侧链结构的引入,包括一些以单取代脲结尾的结构,使可行的核心残基候选物库多样化。对核心电荷配对的研究表明,与二聚体系统不同,三聚体卷曲螺旋即使在存在补偿性羧酸盐的情况下也不能容忍胍-胍接触。总体而言,可行的卷曲螺旋设计名单得到了显著扩展。

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本文引用的文献

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MagicWand: a single, designed peptide that assembles to stable, ordered alpha-helical fibers.
Biochemistry. 2008 Sep 30;47(39):10365-71. doi: 10.1021/bi801072s. Epub 2008 Sep 4.
2
Using alpha-helical coiled-coils to design nanostructured metalloporphyrin arrays.
J Am Chem Soc. 2008 Sep 10;130(36):11921-7. doi: 10.1021/ja800697g. Epub 2008 Aug 19.
3
Simultaneous directed assembly of three distinct heterodimeric coiled coils.
Org Lett. 2008 Sep 4;10(17):3797-800. doi: 10.1021/ol801461a. Epub 2008 Aug 12.
4
Synthetic biology through biomolecular design and engineering.
Curr Opin Struct Biol. 2008 Aug;18(4):491-8. doi: 10.1016/j.sbi.2008.06.006. Epub 2008 Aug 5.
6
Foldamers with heterogeneous backbones.
Acc Chem Res. 2008 Oct;41(10):1399-408. doi: 10.1021/ar800009n. Epub 2008 Jul 1.
7
Interplay among side chain sequence, backbone composition, and residue rigidification in polypeptide folding and assembly.
Proc Natl Acad Sci U S A. 2008 Jul 8;105(27):9151-6. doi: 10.1073/pnas.0801135105. Epub 2008 Jun 27.
8
Noncovalent triblock copolymers based on a coiled-coil peptide motif.
J Am Chem Soc. 2008 Jul 23;130(29):9386-93. doi: 10.1021/ja800254w. Epub 2008 Jun 27.
9
Preferred side-chain constellations at antiparallel coiled-coil interfaces.
Proc Natl Acad Sci U S A. 2008 Jan 15;105(2):530-5. doi: 10.1073/pnas.0709068105. Epub 2008 Jan 9.
10
Orthogonal recognition in dimeric coiled coils via buried polar-group modulation.
J Am Chem Soc. 2008 Jan 30;130(4):1321-7. doi: 10.1021/ja076265w. Epub 2008 Jan 3.

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