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非共价手性信息沿无光学活性的螺旋肽链的传递:通过与N端位点结合的外部分子对C端位点不对称性的变构控制。

Transfer of noncovalent chiral information along an optically inactive helical peptide chain: allosteric control of asymmetry of the C-terminal site by external molecule that binds to the N-terminal site.

作者信息

Ousaka Naoki, Inai Yoshihito

机构信息

Department of Environmental Technology and Urban Planning, Shikumi College, Graduate School of Engineering, Nagoya Institute of Technology, Gokiso-cho, Showa-ku, Nagoya 466-8555, Japan.

出版信息

J Org Chem. 2009 Feb 20;74(4):1429-39. doi: 10.1021/jo801686m.

DOI:10.1021/jo801686m
PMID:19053595
Abstract

This study aims at demonstrating end-to-end transfer of noncovalent chiral information along a peptide chain. The domino-type induction of helical sense is proven by using achiral peptides 1-m of bis-chromophoric sequence with different chain lengths: H-(Aib-Delta(Z)Phe)(m)-(Aib-Delta(Z)Bip)(2)-Aib-OCH(3) [m = 2, 4, and 6; Aib = alpha-aminoisobutyric acid; Delta(Z)Phe = (Z)-alpha,beta-didehydrophenylalanine; Delta(Z)Bip = (Z)-beta-(4,4'-biphenyl)-alpha,beta-didehydroalanine]. They all showed the tendency to adopt a 3(10)-helix. Whereas peptide 1-m originally shows no circular dichroism (CD) signals, marked CD signals were induced at around 270-320 nm based on both the beta-aryl didehydroresidues by chiral Boc-proline (Boc = tert-butoxycarbonyl). The observed CD spectra were interpreted on the basis of the exciton chirality method and theoretical CD simulation of several helical conformations that were energy-minimized. The experimental and theoretical CD analysis reveals that Boc-l-proline induces the preference for a right-handed helicity in the whole chain of 1-m. Such noncovalent chiral induction was not observed in the corresponding N-terminally protected 1-m. Obviously, helicity induction in 1-m originates from the binding of Boc-proline to the N-terminal site. In the 17-mer (1-6), the information of helix sense reaches the 16th residue from the N-terminus. We have monitored precise transfer of noncovalent chiral stimulus along a helical peptide chain. The present study also proposes a primitive allosteric model of a single protein-mimicking backbone. Here chiral molecule binding the N-terminal site of 1-6 controls the chiroptical signals and helical sense of the C-terminal site about 30 A away.

摘要

本研究旨在证明非共价手性信息沿肽链的端到端传递。通过使用具有不同链长的双发色团序列的非手性肽1-m来证明螺旋方向的多米诺型诱导:H-(Aib-Δ(Z)Phe)(m)-(Aib-Δ(Z)Bip)₂-Aib-OCH₃ [m = 2、4和6;Aib = α-氨基异丁酸;Δ(Z)Phe = (Z)-α,β-二脱氢苯丙氨酸;Δ(Z)Bip = (Z)-β-(4,4'-联苯)-α,β-二脱氢丙氨酸]。它们都显示出采用3(10)-螺旋的倾向。虽然肽1-m最初没有圆二色性(CD)信号,但基于手性Boc-脯氨酸(Boc = 叔丁氧羰基)的β-芳基二脱氢残基,在270 - 320 nm左右诱导出明显的CD信号。基于激子手性方法以及对几种能量最小化的螺旋构象的理论CD模拟,对观察到的CD光谱进行了解释。实验和理论CD分析表明,Boc-L-脯氨酸在1-m的整个链中诱导出对右手螺旋的偏好。在相应的N端保护的1-m中未观察到这种非共价手性诱导。显然,1-m中的螺旋诱导源于Boc-脯氨酸与N端位点的结合。在17聚体(1-6)中,螺旋方向的信息从N端到达第16个残基。我们监测了非共价手性刺激沿螺旋肽链的精确传递。本研究还提出了一个单一蛋白质模拟主链的原始变构模型。在这里,与1-6的N端位点结合的手性分子控制着约30 Å外C端位点的手性光学信号和螺旋方向。

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