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短链醇脱氢酶活性中氢化物转移的立体选择性和亲手性探究:定量2H NMR与计算方法相结合

Probing stereoselectivity and pro-chirality of hydride transfer during short-chain alcohol dehydrogenase activity: a combined quantitative 2H NMR and computational approach.

作者信息

Kwiecień Renata A, Ayadi Farouk, Nemmaoui Youssef, Silvestre Virginie, Zhang Ben-Li, Robins Richard J

机构信息

Unit for Interdisciplinary Chemistry: Synthesis, Analysis, Modeling, UMR CNRS6230, CNRS, University of Nantes, 2 rue de la Houssinière, Nantes, France.

出版信息

Arch Biochem Biophys. 2009 Feb;482(1-2):42-51. doi: 10.1016/j.abb.2008.11.019. Epub 2008 Nov 25.

Abstract

Different members of the alcohol oxidoreductase family can transfer the hydride of NAD(P)H to either the re- or the si-face of the substrate. The enantioselectivity of transfer is very variable, even for a range of substrates reduced by the same enzyme. Exploiting quantitative isotopic (2)H NMR to measure the transfer of (2)H from NAD(P)(2)H to ethanol, a range of enantiomeric excess between 0.38 and 0.98, depending on the origin of the enzyme and the nature of the cofactor, has been determined. Critically, in no case was only (R)-[1-(2)H]ethanol or (S)-[1-(2)H]ethanol obtained. By calculating the relative energies of the active site models for hydride transfer to the re- or si-face of short-chain aldehydes by alcohol dehydrogenase from Saccharomyces cerevisiae and Lactobacillus brevis, it is shown that the differences in the energy of the systems when the substrate is positioned with the alkyl group in one or the other pocket of the active site could play a role in determining stereoselectivity. These experiments help to provide insight into structural features that influence the potential catalytic flexibility of different alcohol dehydrogenase activities.

摘要

醇氧化还原酶家族的不同成员可以将NAD(P)H的氢化物转移到底物的Re面或Si面。即使对于同一酶还原的一系列底物,转移的对映选择性也有很大差异。利用定量同位素(2)H NMR测量(2)H从NAD(P)(2)H转移到乙醇的情况,已确定根据酶的来源和辅因子的性质,对映体过量在0.38至0.98之间。至关重要的是,在任何情况下都不会只得到(R)-[1-(2)H]乙醇或(S)-[1-(2)H]乙醇。通过计算酿酒酵母和短乳杆菌的醇脱氢酶将氢化物转移到短链醛的Re面或Si面的活性位点模型的相对能量,结果表明当底物的烷基位于活性位点的一个或另一个口袋中时,系统能量的差异可能在决定立体选择性方面发挥作用。这些实验有助于深入了解影响不同醇脱氢酶活性潜在催化灵活性的结构特征。

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