Luo Yan, Wang Ying
Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan 430074, China.
Yi Chuan. 2008 Nov;30(11):1499-505.
U2AF (U2 snRNP auxiliary factor), an essential auxiliary factor for pre-mRNA splicing, is highly conserved across species. Here we report the cloning and expression analysis of the homologous gene (SmU2AF65) encoding the large subunit of U2AF65 in Solanum melongena. Gene specific primers for Rapid Amplification of cDNA Ends (RACE) are designed according to the genomic sequence of eggplant BAC 77N19 and the full length cDNA of tobacco NpU2AF65 a and b. The full length cDNA of SmU2AF65 (GenBank accession No. EU543263) contains a complete open reading fragment encoding a 554 amino acid protein, and the deduced protein contains three conserved RNA recognition domains (RRM). RT-PCR assays indicate that SmU2AF65 is constitutively expressed in leaf, flower, and root, with a different transcript found in root originated from alternative splicing.
U2AF(U2 小核核糖核蛋白辅助因子)是前体 mRNA 剪接所必需的辅助因子,在物种间高度保守。在此我们报告了茄子中编码 U2AF65 大亚基的同源基因(SmU2AF65)的克隆及表达分析。根据茄子 BAC 77N19 的基因组序列以及烟草 NpU2AF65 a 和 b 的全长 cDNA 设计了用于 cDNA 末端快速扩增(RACE)的基因特异性引物。SmU2AF65 的全长 cDNA(GenBank 登录号 EU543263)包含一个完整的开放阅读框,编码一个 554 个氨基酸的蛋白质,推导的蛋白质含有三个保守的 RNA 识别结构域(RRM)。RT-PCR 分析表明,SmU2AF65 在叶、花和根中组成型表达,在根中发现了一种源自可变剪接的不同转录本。